Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC090115.4-201ENST00000609970 188 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 AC006441.5-201ENST00000612680 209 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 RNVU1-4-201ENST00000612985 164 ntBASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL25A1Q9BXS0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 RNU6-633P-201ENST00000362612 103 ntBASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 SNORD58A-201ENST00000383875 65 ntBASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 RN7SL863P-201ENST00000462370 296 ntBASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 RNA5SP458-201ENST00000516188 119 ntBASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 RNU7-25P-201ENST00000516544 62 ntBASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 MIR4778-201ENST00000577635 80 ntBASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 AC091932.4-201ENST00000623386 200 ntBASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 AL356274.2-201ENST00000624379 3752 ntBASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL25A1Q9BXS0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 AC006504.1-201ENST00000562493 3666 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 RNU4-16P-201ENST00000364737 141 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 Y_RNA.351-201ENST00000365436 96 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 Y_RNA.355-201ENST00000365462 98 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 RNU6-1201P-201ENST00000384227 107 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 AC233266.1-201ENST00000454518 96 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 RNU7-80P-201ENST00000459562 61 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 AC002984.1-201ENST00000591692 448 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 AC145423.2-201ENST00000610631 239 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 AC242852.1-201ENST00000612151 96 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 AC244015.1-201ENST00000622301 99 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 AP003355.3-201ENST00000623465 114 ntBASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
COL25A1Q9BXS0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 MIR126-201ENST00000362291 85 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 SNORA31-201ENST00000362607 130 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 RNU6-590P-201ENST00000365039 107 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 Y_RNA.338-201ENST00000365320 114 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 Y_RNA.547-201ENST00000384654 119 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 SNORA7.5-201ENST00000410672 110 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 AL512326.2-201ENST00000426359 151 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 AC009414.1-201ENST00000427200 443 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 FTH1P12-201ENST00000432137 551 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 AC105272.1-201ENST00000438604 198 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 AL110115.1-201ENST00000614396 364 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.48□□□□□ -1.85
COL25A1Q9BXS0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 Y_RNA.430-201ENST00000384081 110 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 U8.15-201ENST00000390947 134 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 RNA5SP144-201ENST00000410846 116 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 AL445646.1-201ENST00000431784 216 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 RPL23AP63-201ENST00000498752 471 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 RNA5SP24-201ENST00000516478 95 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 Y_RNA.714-201ENST00000517065 90 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 AC004812.1-201ENST00000540773 146 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 AC090517.3-201ENST00000625170 141 ntBASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL25A1Q9BXS0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
COL25A1Q9BXS0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 MAPK10-373ENST00000641983 6772 ntBASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 RNU6-616P-201ENST00000384353 107 ntBASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 MIR522-201ENST00000385071 87 ntBASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 AL135938.1-201ENST00000443141 297 ntBASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 RNA5SP310-201ENST00000459084 116 ntBASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 AC114801.3-201ENST00000510231 177 ntBASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 MIR4439-201ENST00000583746 80 ntBASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 AC078899.2-201ENST00000595282 212 ntBASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 uc_338.14-201ENST00000613162 166 ntBASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
COL25A1Q9BXS0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL25A1Q9BXS0 HMGN2P8-201ENST00000391458 268 ntBASIC3.45□□□□□ -1.86
COL25A1Q9BXS0 AC097463.2-201ENST00000421074 142 ntBASIC3.45□□□□□ -1.86
COL25A1Q9BXS0 AL139132.1-201ENST00000431587 344 ntBASIC3.45□□□□□ -1.86
COL25A1Q9BXS0 RNA5SP309-201ENST00000516670 106 ntBASIC3.45□□□□□ -1.86
COL25A1Q9BXS0 AC018630.2-201ENST00000534866 2403 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms