Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 Y_RNA.368-201ENST00000365547 113 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 AL355497.1-201ENST00000406262 551 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.57□□□□□ -2
LRFN3Q9BTN0 RN7SL633P-201ENST00000488974 297 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.57□□□□□ -2
LRFN3Q9BTN0 SCARNA8-201ENST00000515924 131 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 RNU6-453P-201ENST00000516819 85 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 RNA5SP480-201ENST00000516840 109 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.57□□□□□ -2
LRFN3Q9BTN0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.57□□□□□ -2
LRFN3Q9BTN0 MIR6873-201ENST00000622788 63 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 U6.115-201ENST00000636045 103 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LRFN3Q9BTN0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
LRFN3Q9BTN0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRFN3Q9BTN0 RNY1P10-201ENST00000363268 113 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 RNU6-418P-201ENST00000384035 107 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 SNORA40-201ENST00000388090 126 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 RNU6-855P-201ENST00000410395 104 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 RNU6-57P-201ENST00000411348 103 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 Y_RNA.629-201ENST00000411368 105 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 MTND4LP9-201ENST00000427694 174 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 AC008267.6-201ENST00000441664 139 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 AC010531.2-201ENST00000465012 153 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 AC107027.2-201ENST00000512197 115 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
LRFN3Q9BTN0 SNORA25.12-201ENST00000516202 82 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 AC109810.1-201ENST00000534066 224 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 DNAJC19P2-201ENST00000593340 302 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 AL031274.2-201ENST00000599419 203 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 AC090115.4-201ENST00000609970 188 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 Y_RNA.802-201ENST00000614892 130 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 MIR3658-201ENST00000636291 56 ntBASIC2.56□□□□□ -2
LRFN3Q9BTN0 RNA5SP325-201ENST00000363756 130 ntBASIC2.55□□□□□ -2
LRFN3Q9BTN0 Y_RNA.261-201ENST00000364631 102 ntBASIC2.55□□□□□ -2
LRFN3Q9BTN0 Y_RNA.310-201ENST00000365063 113 ntBASIC2.55□□□□□ -2
LRFN3Q9BTN0 Y_RNA.341-201ENST00000365341 102 ntBASIC2.55□□□□□ -2
LRFN3Q9BTN0 Y_RNA.456-201ENST00000384232 111 ntBASIC2.55□□□□□ -2
LRFN3Q9BTN0 RPL39P40-201ENST00000445481 146 ntBASIC2.55□□□□□ -2
LRFN3Q9BTN0 RNU7-141P-201ENST00000459304 62 ntBASIC2.55□□□□□ -2
LRFN3Q9BTN0 RNU6-856P-201ENST00000516959 98 ntBASIC2.55□□□□□ -2
LRFN3Q9BTN0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.55□□□□□ -2
LRFN3Q9BTN0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.55□□□□□ -2
LRFN3Q9BTN0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
LRFN3Q9BTN0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.54□□□□□ -2
LRFN3Q9BTN0 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 RNA5SP205-201ENST00000364653 136 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 RNU6-969P-201ENST00000383900 105 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 SNORD20-201ENST00000384550 80 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 SNORA20-201ENST00000384662 132 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 RNU6-376P-201ENST00000384731 106 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 SNORA46-201ENST00000384762 135 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 MIR616-201ENST00000385293 97 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 U8.13-201ENST00000390842 128 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 MIR1262-201ENST00000408276 93 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 RNA5SP270-201ENST00000411361 118 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 RPL30P13-201ENST00000418873 348 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.54□□□□□ -2
LRFN3Q9BTN0 RNU6-1007P-201ENST00000516586 107 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 RNU6-971P-201ENST00000516920 106 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
LRFN3Q9BTN0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.54□□□□□ -2
LRFN3Q9BTN0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
LRFN3Q9BTN0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
LRFN3Q9BTN0 Y_RNA.218-201ENST00000364218 104 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 MIR526A2-201ENST00000390198 65 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 MIR513C-201ENST00000401352 84 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 AL359511.1-201ENST00000402970 211 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 CYCSP49-201ENST00000420810 319 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.53□□□□□ -2
LRFN3Q9BTN0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.53□□□□□ -2
LRFN3Q9BTN0 AC016717.1-201ENST00000448918 286 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.53□□□□□ -2
LRFN3Q9BTN0 AC245047.8-201ENST00000456455 284 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.53□□□□□ -2
LRFN3Q9BTN0 SNORA4-201ENST00000584302 138 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 AC006435.5-201ENST00000624486 112 ntBASIC2.53□□□□□ -2
LRFN3Q9BTN0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.53□□□□□ -2
LRFN3Q9BTN0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 MIR378A-201ENST00000362177 66 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.127-201ENST00000363386 109 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 RNU6-1205P-201ENST00000363625 106 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.172-201ENST00000363765 102 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.224-201ENST00000364308 111 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.337-201ENST00000365312 102 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 MIR524-201ENST00000385242 87 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 MT-TT-201ENST00000387460 66 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 AC006461.1-201ENST00000412637 326 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 AL353689.1-201ENST00000438895 199 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 TRMT112P2-201ENST00000512910 132 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 AL391903.3-201ENST00000612158 163 ntBASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.52□□□□□ -2.01
LRFN3Q9BTN0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms