Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SNORA28-201ENST00000606769 126 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-324P-201ENST00000363957 106 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 SNORD115-30-201ENST00000364117 82 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 SNORD1A-201ENST00000364968 72 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.380-201ENST00000365663 111 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.556-201ENST00000384677 113 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 MIR215-201ENST00000384858 110 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 MIR194-1-201ENST00000384892 85 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 SNORA26.9-201ENST00000391322 122 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 RNU2-54P-201ENST00000410299 190 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 AL161935.2-201ENST00000414627 60 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 AL591806.2-201ENST00000433122 173 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 LINC01399-202ENST00000458450 244 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-1132P-201ENST00000459214 107 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 AC091021.1-201ENST00000468051 388 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 RNU2-56P-201ENST00000516826 190 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 MIR4524B-201ENST00000581569 115 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 AC012493.3-201ENST00000604494 112 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 AC021506.2-201ENST00000612354 169 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.14-201ENST00000362415 103 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.276-201ENST00000364732 109 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-847P-201ENST00000411115 108 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 RPL21P38-201ENST00000418090 167 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-155P-201ENST00000516347 100 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-897P-201ENST00000517135 105 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 AC040926.1-201ENST00000530195 238 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 AC012433.1-201ENST00000588916 398 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 AP001282.2-201ENST00000616149 309 ntBASIC1.87□□□□□ -2.11
HERPUD2Q9BSE4 snoU2_19.2-201ENST00000363024 80 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 SNORD14.1-201ENST00000365609 90 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 MIR513A1-201ENST00000385138 129 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 SNORD58.1-201ENST00000391313 66 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 AL031003.1-201ENST00000404229 172 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 AL603908.1-201ENST00000406098 201 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 AC093852.1-201ENST00000503587 266 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 AC108210.2-201ENST00000503681 201 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 RNY3P15-201ENST00000516297 97 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-341P-201ENST00000516973 96 ntBASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HERPUD2Q9BSE4 WWP1P1-201ENST00000466609 2769 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.350-201ENST00000365409 98 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 RNA5SP259-201ENST00000365541 109 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.461-201ENST00000384263 103 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.477-201ENST00000384352 108 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.551-201ENST00000384661 102 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-136P-201ENST00000384663 107 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 MIR520G-201ENST00000385064 90 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 STAG3L5P-204ENST00000443759 179 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 PGBD4P5-201ENST00000445958 426 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 MTND4LP30-201ENST00000454092 297 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 AC099513.1-201ENST00000490423 301 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-1023P-201ENST00000516137 106 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.673-201ENST00000516306 88 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-548P-201ENST00000517083 115 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-111P-201ENST00000517179 105 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 AC136932.1-201ENST00000574771 208 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 MIR4643-201ENST00000577473 78 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 AC015688.6-201ENST00000577737 104 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 MIR3937-201ENST00000580135 106 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 MIR6845-201ENST00000613182 61 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 AC141273.2-201ENST00000618989 130 ntBASIC1.85□□□□□ -2.11
HERPUD2Q9BSE4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.458-201ENST00000384240 102 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 RPEP5-201ENST00000441137 268 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AC245517.4-201ENST00000448601 281 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AC233266.1-201ENST00000454518 96 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AC107393.1-201ENST00000512403 346 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 RNA5SP445-201ENST00000515889 115 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-397P-201ENST00000516226 104 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AC019176.1-201ENST00000518519 225 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AP002004.2-201ENST00000531656 154 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AC091178.2-201ENST00000584401 117 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AC242852.1-201ENST00000612151 96 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 AC244015.1-201ENST00000622301 99 ntBASIC1.84□□□□□ -2.11
HERPUD2Q9BSE4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms