Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1□□□□□ -2.25
SCN2AQ99250 GHRLOS.1-201ENST00000610995 70 ntBASIC1□□□□□ -2.25
SCN2AQ99250 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1□□□□□ -2.25
SCN2AQ99250 ICE2P2-201ENST00000483823 2787 ntBASIC1□□□□□ -2.25
SCN2AQ99250 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1□□□□□ -2.25
SCN2AQ99250 MIR369-201ENST00000362155 70 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 RNU6-1115P-201ENST00000362490 106 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 RNU6-833P-201ENST00000363486 107 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 Y_RNA.265-201ENST00000364677 108 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 SNORA20B-201ENST00000384220 132 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 RNU1-78P-201ENST00000391248 165 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 AC022028.1-201ENST00000412054 408 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 MTATP6P23-201ENST00000440153 476 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 Z98949.2-201ENST00000440996 144 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 AC022493.2-201ENST00000506122 481 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 RNU6-1170P-201ENST00000515974 106 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 RNU7-4P-201ENST00000516961 62 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 RPL21P9-201ENST00000556149 474 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 MIR4795-201ENST00000584182 89 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 MIR8065-201ENST00000620577 100 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 AC138305.3-201ENST00000624988 240 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 AC134503.1-201ENST00000633048 54 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SCN2AQ99250 RNY3P11-201ENST00000364153 102 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 Y_RNA.419-201ENST00000384041 102 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.99□□□□□ -2.25
SCN2AQ99250 RPS26P55-201ENST00000471178 356 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 AC091179.3-201ENST00000474761 144 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 OR9P1P-201ENST00000496431 281 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.99□□□□□ -2.25
SCN2AQ99250 Y_RNA.661-201ENST00000516003 99 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 RNU6-341P-201ENST00000516973 96 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 CYCSP23-201ENST00000519781 313 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 AP002001.1-203ENST00000534002 267 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 AL357312.1-201ENST00000603879 298 ntBASIC0.99□□□□□ -2.25
SCN2AQ99250 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SCN2AQ99250 SNORA33-201ENST00000363664 130 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 RNU6-424P-201ENST00000384367 105 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 SNORA12.1-201ENST00000390873 148 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 RNU6-710P-201ENST00000410424 105 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 Y_RNA.605-201ENST00000410577 105 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.98□□□□□ -2.25
SCN2AQ99250 AL117351.2-201ENST00000513571 157 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 Y_RNA.715-201ENST00000517082 110 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 MIR6788-201ENST00000618842 66 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 AC027279.3-201ENST00000625055 122 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 RNU6-1084P-201ENST00000362498 107 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 RNU4-41P-201ENST00000364426 143 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 Y_RNA.456-201ENST00000384232 111 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 RNU6-440P-201ENST00000390882 105 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 RNU5A-5P-201ENST00000411054 116 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 CHEK2P4-201ENST00000450340 246 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 AL133255.1-201ENST00000606374 441 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 PVT1_3.1-201ENST00000620853 95 ntBASIC0.98□□□□□ -2.25
SCN2AQ99250 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SCN2AQ99250 Y_RNA.267-201ENST00000364679 109 ntBASIC0.97□□□□□ -2.25
SCN2AQ99250 RNU1-133P-201ENST00000364867 167 ntBASIC0.97□□□□□ -2.25
SCN2AQ99250 RNU6-1031P-201ENST00000384773 107 ntBASIC0.97□□□□□ -2.25
SCN2AQ99250 MIR660-201ENST00000385235 97 ntBASIC0.97□□□□□ -2.25
SCN2AQ99250 RNU6-308P-201ENST00000390957 107 ntBASIC0.97□□□□□ -2.25
SCN2AQ99250 RNU7-128P-201ENST00000517247 62 ntBASIC0.97□□□□□ -2.25
SCN2AQ99250 RAB11AP2-201ENST00000545905 639 ntBASIC0.97□□□□□ -2.25
SCN2AQ99250 AC005176.2-201ENST00000596933 147 ntBASIC0.97□□□□□ -2.25
SCN2AQ99250 AC004467.1-201ENST00000615678 330 ntBASIC0.97□□□□□ -2.25
SCN2AQ99250 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SCN2AQ99250 RNU6-199P-201ENST00000362954 107 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 Y_RNA.329-201ENST00000365209 107 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 Y_RNA.383-201ENST00000383855 97 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 RNU6-310P-201ENST00000384655 107 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 MIR222-201ENST00000384992 110 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 MIR520G-201ENST00000385064 90 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 MIR559-201ENST00000385188 96 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 RPL21P38-201ENST00000418090 167 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 MTND4P19-201ENST00000446659 478 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 SNORA31.4-201ENST00000516049 129 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 MIR5188-201ENST00000583467 113 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 POLR3GP1-201ENST00000594073 261 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 AC120024.3-201ENST00000603167 156 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 AL513534.2-201ENST00000603836 250 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 SNORA28-201ENST00000606769 126 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 Y_RNA.5-201ENST00000362334 102 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 RNU6-1175P-201ENST00000365200 107 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 Y_RNA.527-201ENST00000384573 102 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 AL390729.2-201ENST00000416137 156 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 AC005002.2-201ENST00000438228 269 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 HSPE1P21-201ENST00000438283 308 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 RPL30P7-201ENST00000479312 323 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 AL160236.1-201ENST00000556317 195 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 SNORA77B-201ENST00000578179 125 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 MIR4762-201ENST00000585261 75 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 AC104695.3-201ENST00000604052 296 ntBASIC0.96□□□□□ -2.26
SCN2AQ99250 MIR302D-201ENST00000362275 68 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 Y_RNA.101-201ENST00000363154 102 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 Y_RNA.222-201ENST00000364264 102 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 AL451046.2-201ENST00000403074 277 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 RNU4-30P-201ENST00000410245 143 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 Y_RNA.604-201ENST00000410574 102 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 RNU6-1199P-201ENST00000411249 104 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 RPL39P38-201ENST00000467018 153 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 AC105758.1-201ENST00000506038 399 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms