Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.36□□□□□ -2.03
HAPLN3Q96S86 Y_RNA.802-201ENST00000614892 130 ntBASIC2.36□□□□□ -2.03
HAPLN3Q96S86 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.36□□□□□ -2.03
HAPLN3Q96S86 RNU4-84P-201ENST00000364200 139 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 RNU6-117P-201ENST00000365415 107 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 MT-TT-201ENST00000387460 66 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 MIR526A2-201ENST00000390198 65 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 RNU6-578P-201ENST00000390980 103 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 Y_RNA.797-201ENST00000515977 94 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 RN7SKP164-201ENST00000516138 266 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.35□□□□□ -2.03
HAPLN3Q96S86 MIR4744-201ENST00000581563 82 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 MIR4524B-201ENST00000581569 115 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 AP000553.5-201ENST00000641933 54 ntBASIC2.35□□□□□ -2.03
HAPLN3Q96S86 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HAPLN3Q96S86 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
HAPLN3Q96S86 RNU1-91P-201ENST00000364746 163 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 RNU6-1240P-201ENST00000365155 104 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 RNU1-148P-201ENST00000384472 162 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 RNA5SP511-201ENST00000410487 115 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 AC007064.1-201ENST00000412238 351 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 AC245047.8-201ENST00000456455 284 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 RNU1-131P-201ENST00000458943 161 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.34□□□□□ -2.03
HAPLN3Q96S86 AP003357.1-201ENST00000604497 148 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 MIR548AY-201ENST00000617669 107 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 AC006435.5-201ENST00000624486 112 ntBASIC2.34□□□□□ -2.03
HAPLN3Q96S86 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HAPLN3Q96S86 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HAPLN3Q96S86 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HAPLN3Q96S86 RNU6-271P-201ENST00000363858 105 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 Y_RNA.229-201ENST00000364347 113 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 RNU6-144P-201ENST00000383951 107 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 SNORD116-18-201ENST00000383961 92 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 RNU6-1323P-201ENST00000384025 107 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 RNU6-160P-201ENST00000384591 107 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 MIR616-201ENST00000385293 97 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 MIR1262-201ENST00000408276 93 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 SNORA36B-201ENST00000410438 131 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.33□□□□□ -2.04
HAPLN3Q96S86 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 RPS29P21-201ENST00000496272 170 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 RNU6-561P-201ENST00000516222 102 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 AC015720.1-201ENST00000565251 277 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
HAPLN3Q96S86 MIR203B-201ENST00000636080 86 ntBASIC2.33□□□□□ -2.04
HAPLN3Q96S86 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HAPLN3Q96S86 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HAPLN3Q96S86 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HAPLN3Q96S86 RNU6-103P-201ENST00000363686 107 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 RNU6-704P-201ENST00000364162 103 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 MIR613-201ENST00000385248 95 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 MIR1278-201ENST00000408753 81 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 EBAG9P1-201ENST00000418955 543 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 AC060773.1-201ENST00000421698 310 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 AC010409.1-201ENST00000487382 476 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 RPL36AP21-201ENST00000490372 323 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
HAPLN3Q96S86 AC127455.1-201ENST00000565496 145 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 MIR3126-201ENST00000577443 74 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 MIR4658-201ENST00000584344 65 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 POLR3GP1-201ENST00000594073 261 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 AC005972.2-201ENST00000604690 348 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 U2.20-201ENST00000613956 192 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 AC009831.4-201ENST00000620744 325 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.32□□□□□ -2.04
HAPLN3Q96S86 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HAPLN3Q96S86 RNU6-136P-201ENST00000384663 107 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 MIR221-201ENST00000385135 110 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 MIR29C-201ENST00000385231 88 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.31□□□□□ -2.04
HAPLN3Q96S86 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.31□□□□□ -2.04
HAPLN3Q96S86 AL353689.1-201ENST00000438895 199 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HAPLN3Q96S86 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.31□□□□□ -2.04
HAPLN3Q96S86 RNA5SP200-201ENST00000516360 103 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 RNU7-121P-201ENST00000516604 62 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 RNA5SP137-201ENST00000516833 135 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.31□□□□□ -2.04
HAPLN3Q96S86 AC109810.1-201ENST00000534066 224 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.31□□□□□ -2.04
HAPLN3Q96S86 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.31□□□□□ -2.04
HAPLN3Q96S86 MIR4724-201ENST00000579485 89 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 MIR5688-201ENST00000580619 83 ntBASIC2.31□□□□□ -2.04
HAPLN3Q96S86 RNU1-22P-201ENST00000363334 158 ntBASIC2.3□□□□□ -2.04
HAPLN3Q96S86 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
HAPLN3Q96S86 SNORD50.2-201ENST00000365465 70 ntBASIC2.3□□□□□ -2.04
HAPLN3Q96S86 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.3□□□□□ -2.04
HAPLN3Q96S86 RNU6-449P-201ENST00000383914 107 ntBASIC2.3□□□□□ -2.04
HAPLN3Q96S86 RNU6-239P-201ENST00000390990 99 ntBASIC2.3□□□□□ -2.04
HAPLN3Q96S86 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.3□□□□□ -2.04
HAPLN3Q96S86 RN7SKP223-201ENST00000410582 62 ntBASIC2.3□□□□□ -2.04
HAPLN3Q96S86 RPS27P22-201ENST00000478056 241 ntBASIC2.3□□□□□ -2.04
HAPLN3Q96S86 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
HAPLN3Q96S86 AC005840.1-201ENST00000498412 377 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms