Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 MIR4762-201ENST00000585261 75 ntBASIC0.98□□□□□ -2.25
ZNF560Q96MR9 PRELID3BP2-201ENST00000605362 201 ntBASIC0.98□□□□□ -2.25
ZNF560Q96MR9 Y_RNA.101-201ENST00000363154 102 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 RNU6-926P-201ENST00000384075 107 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 RNU6-890P-201ENST00000384121 107 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 Y_RNA.505-201ENST00000384489 102 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 RPS26P48-201ENST00000491713 339 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 RNU6-911P-201ENST00000516523 104 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 AC022616.4-201ENST00000522985 181 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.97□□□□□ -2.25
ZNF560Q96MR9 AC005176.2-201ENST00000596933 147 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 AC113139.1-201ENST00000605049 239 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
ZNF560Q96MR9 SNORD68-201ENST00000363214 84 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 SNORD114-24-201ENST00000365029 72 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.336-201ENST00000365307 109 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.474-201ENST00000384341 102 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 MIR200A-201ENST00000384875 90 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 MIR452-201ENST00000385020 85 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 SNORD78.2-201ENST00000391076 69 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.599-201ENST00000410489 109 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.605-201ENST00000410577 105 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 RNU2-61P-201ENST00000411069 191 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 MRPS18CP6-201ENST00000423587 223 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.96□□□□□ -2.26
ZNF560Q96MR9 PRDX4P1-201ENST00000507189 574 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 RNU6-1012P-201ENST00000516606 109 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.96□□□□□ -2.26
ZNF560Q96MR9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.96□□□□□ -2.26
ZNF560Q96MR9 AL020996.3-201ENST00000606617 222 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 AC133104.2-201ENST00000615272 193 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 AL591926.4-201ENST00000616895 298 ntBASIC0.96□□□□□ -2.26
ZNF560Q96MR9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ZNF560Q96MR9 RNU6-626P-201ENST00000363354 107 ntBASIC0.95□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.621-201ENST00000411065 96 ntBASIC0.95□□□□□ -2.26
ZNF560Q96MR9 RNU6-1199P-201ENST00000411249 104 ntBASIC0.95□□□□□ -2.26
ZNF560Q96MR9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.95□□□□□ -2.26
ZNF560Q96MR9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.95□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.653-201ENST00000459091 95 ntBASIC0.95□□□□□ -2.26
ZNF560Q96MR9 U8.19-201ENST00000459095 133 ntBASIC0.95□□□□□ -2.26
ZNF560Q96MR9 AC114811.1-201ENST00000507207 168 ntBASIC0.95□□□□□ -2.26
ZNF560Q96MR9 AC011604.1-201ENST00000545978 196 ntBASIC0.95□□□□□ -2.26
ZNF560Q96MR9 AL096861.1-201ENST00000610899 123 ntBASIC0.95□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.230-201ENST00000364348 109 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 RNU6-20P-201ENST00000384106 107 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 POLR2J4-204ENST00000418424 324 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 PIGPP3-201ENST00000425307 415 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 RPEP5-201ENST00000441137 268 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 AC093019.1-201ENST00000443135 252 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 AC245047.8-201ENST00000456455 284 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 RNU7-21P-201ENST00000459430 62 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 SNORD111.1-201ENST00000516421 86 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 AL391903.3-201ENST00000612158 163 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 AL008636.1-201ENST00000625038 1018 ntBASIC0.94□□□□□ -2.26
ZNF560Q96MR9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
ZNF560Q96MR9 RNU6-490P-201ENST00000362985 107 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 RNU6-969P-201ENST00000383900 105 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.446-201ENST00000384178 104 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 SNORD116-13-201ENST00000384408 92 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 MIR520E-201ENST00000384867 87 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 MIR1298-201ENST00000408783 112 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 AC099799.1-201ENST00000439809 192 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.93□□□□□ -2.26
ZNF560Q96MR9 MTCO3P10-201ENST00000455912 772 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 RPL30P15-201ENST00000457129 321 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 RNU7-169P-201ENST00000459456 61 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 SNORD124-201ENST00000459577 104 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 RNU6-559P-201ENST00000516151 98 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 RNU6-436P-201ENST00000516171 114 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.93□□□□□ -2.26
ZNF560Q96MR9 FAM71BP1-201ENST00000604431 523 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 U2.1-201ENST00000618978 145 ntBASIC0.93□□□□□ -2.26
ZNF560Q96MR9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
ZNF560Q96MR9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.93□□□□□ -2.26
ZNF560Q96MR9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
ZNF560Q96MR9 AC008163.1-202ENST00000636004 2889 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 AC117470.1-201ENST00000381974 330 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 AC098614.3-201ENST00000438957 440 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 CHEK2P4-201ENST00000450340 246 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 RNU7-90P-201ENST00000459216 62 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 MIR3973-201ENST00000579824 107 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 MIR4659A-201ENST00000580269 81 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 AC005972.2-201ENST00000604690 348 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 AC138305.3-201ENST00000624988 240 ntBASIC0.92□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.27-201ENST00000362540 103 ntBASIC0.91□□□□□ -2.26
ZNF560Q96MR9 RNU6-324P-201ENST00000363957 106 ntBASIC0.91□□□□□ -2.26
ZNF560Q96MR9 Y_RNA.314-201ENST00000365114 102 ntBASIC0.91□□□□□ -2.26
ZNF560Q96MR9 RNU6-1304P-201ENST00000411374 106 ntBASIC0.91□□□□□ -2.26
ZNF560Q96MR9 AC138393.2-201ENST00000414742 246 ntBASIC0.91□□□□□ -2.26
ZNF560Q96MR9 snoU13.25-201ENST00000458945 104 ntBASIC0.91□□□□□ -2.26
ZNF560Q96MR9 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
ZNF560Q96MR9 SNORA25.10-201ENST00000515926 124 ntBASIC0.91□□□□□ -2.26
ZNF560Q96MR9 RNU6-155P-201ENST00000516347 100 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms