Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 U4atac.1-201ENST00000618345 95 ntBASIC2.23□□□□□ -2.05
CCDC17Q96LX7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC17Q96LX7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CCDC17Q96LX7 RNU6-271P-201ENST00000363858 105 ntBASIC2.22□□□□□ -2.05
CCDC17Q96LX7 RNU6-886P-201ENST00000384319 105 ntBASIC2.22□□□□□ -2.05
CCDC17Q96LX7 Y_RNA.555-201ENST00000384673 110 ntBASIC2.22□□□□□ -2.05
CCDC17Q96LX7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.22□□□□□ -2.05
CCDC17Q96LX7 SRIP3-201ENST00000413200 219 ntBASIC2.22□□□□□ -2.05
CCDC17Q96LX7 RPS27P22-201ENST00000478056 241 ntBASIC2.22□□□□□ -2.05
CCDC17Q96LX7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC17Q96LX7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.22□□□□□ -2.05
CCDC17Q96LX7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC17Q96LX7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC17Q96LX7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC17Q96LX7 AL159152.1-201ENST00000635019 2587 ntBASIC2.22□□□□□ -2.05
CCDC17Q96LX7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.21□□□□□ -2.05
CCDC17Q96LX7 RNU6-1020P-201ENST00000363684 107 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 RNU6-899P-201ENST00000363947 107 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 RNU6-417P-201ENST00000384712 107 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 CYCSP49-201ENST00000420810 319 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC17Q96LX7 AC010409.1-201ENST00000487382 476 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC17Q96LX7 AC011406.1-201ENST00000512440 370 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 AC068647.2-201ENST00000637380 353 ntBASIC2.21□□□□□ -2.06
CCDC17Q96LX7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CCDC17Q96LX7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 RNU1-22P-201ENST00000363334 158 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 Y_RNA.180-201ENST00000363867 113 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC17Q96LX7 RNU1-148P-201ENST00000384472 162 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 HMGN2P34-201ENST00000437647 269 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 HSPE1P21-201ENST00000438283 308 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC17Q96LX7 RNU7-115P-201ENST00000516433 55 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC17Q96LX7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC17Q96LX7 AP005660.1-201ENST00000522972 293 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 AC100767.1-201ENST00000528178 123 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 AC015720.1-201ENST00000565251 277 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 AL353997.5-201ENST00000618886 171 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 U6.73-201ENST00000619194 103 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 AC006435.5-201ENST00000624486 112 ntBASIC2.2□□□□□ -2.06
CCDC17Q96LX7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC17Q96LX7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
CCDC17Q96LX7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CCDC17Q96LX7 CENPCP1-201ENST00000533085 2578 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC17Q96LX7 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 snoU2_19.4-201ENST00000364329 80 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 Y_RNA.233-201ENST00000364407 101 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 Y_RNA.270-201ENST00000364693 104 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 MIR626-201ENST00000385032 94 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 RNA5SP467-201ENST00000391274 118 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 AL355497.1-201ENST00000406262 551 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC17Q96LX7 RNU6-1219P-201ENST00000516143 112 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 MIR4438-201ENST00000585271 93 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 AC005972.2-201ENST00000604690 348 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 AC072026.1-201ENST00000605023 201 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 MIR338-201ENST00000636369 67 ntBASIC2.19□□□□□ -2.06
CCDC17Q96LX7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC17Q96LX7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC17Q96LX7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CCDC17Q96LX7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC17Q96LX7 Y_RNA.24-201ENST00000362508 103 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 SNORA33-201ENST00000363664 130 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 RNU1-96P-201ENST00000364163 162 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 RNU6-1323P-201ENST00000384025 107 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 AL117342.1-201ENST00000404861 406 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 MIR1253-201ENST00000408273 105 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 EDDM3CP-201ENST00000415977 425 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 AL162725.1-201ENST00000435405 301 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC17Q96LX7 SCARNA8-201ENST00000515924 131 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 RNU2-4P-201ENST00000606190 192 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.18□□□□□ -2.06
CCDC17Q96LX7 U6.108-201ENST00000637764 58 ntBASIC2.18□□□□□ -2.06
CCDC17Q96LX7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CCDC17Q96LX7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC17Q96LX7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC17Q96LX7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 RNA5SP493-201ENST00000364115 91 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 RNU6-1062P-201ENST00000383908 107 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CCDC17Q96LX7 SNORA36B-201ENST00000410438 131 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 RNU6-383P-201ENST00000410864 94 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 EBAG9P1-201ENST00000418955 543 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 RNU1-131P-201ENST00000458943 161 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 RNU6-717P-201ENST00000459076 104 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 RPL36AP21-201ENST00000490372 323 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC17Q96LX7 AC097462.1-201ENST00000514125 324 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 RNU6-453P-201ENST00000516819 85 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 293.9 ms