Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPL23AP42-201ENST00000471152 471 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 RNA5SP481-201ENST00000516814 122 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 RNU6-341P-201ENST00000516973 96 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 RNU6-1096P-201ENST00000517089 102 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 AL162424.1-201ENST00000602325 221 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 BX284668.6-201ENST00000606899 438 ntBASIC2.25□□□□□ -2.05
HPS3Q969F9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
HPS3Q969F9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.24□□□□□ -2.05
HPS3Q969F9 RNU6-1272P-201ENST00000362776 107 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 RNU6-899P-201ENST00000363947 107 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 Y_RNA.217-201ENST00000364214 105 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 SNORA63D-201ENST00000364359 132 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 Y_RNA.267-201ENST00000364679 109 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 Y_RNA.307-201ENST00000365022 117 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 Y_RNA.489-201ENST00000384410 101 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 RNU6-1289P-201ENST00000384431 106 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.24□□□□□ -2.05
HPS3Q969F9 AL135790.2-201ENST00000437701 267 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 Y_RNA.641-201ENST00000459414 105 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 AC025033.1-201ENST00000463883 194 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 POLR3GP1-201ENST00000594073 261 ntBASIC2.24□□□□□ -2.05
HPS3Q969F9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.24□□□□□ -2.05
HPS3Q969F9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
HPS3Q969F9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HPS3Q969F9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
HPS3Q969F9 Y_RNA.188-201ENST00000363952 111 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 RNU6-740P-201ENST00000364734 105 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 SNORA20.1-201ENST00000364790 130 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 Y_RNA.447-201ENST00000384184 113 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 RNU6-763P-201ENST00000390865 106 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 Y_RNA.590-201ENST00000410140 107 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 RNA5SP100-201ENST00000410903 110 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 RNA5SP59-201ENST00000410922 110 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 BTF3P11-201ENST00000426582 477 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AC245047.3-201ENST00000429428 127 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AC104332.1-201ENST00000440471 797 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 RPL23AP6-201ENST00000446637 472 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 RPS4XP11-201ENST00000446897 772 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AC233266.1-201ENST00000454518 96 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 U8.19-201ENST00000459095 133 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.23□□□□□ -2.05
HPS3Q969F9 Y_RNA.679-201ENST00000516416 91 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 RNU1-40P-201ENST00000516816 164 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 RNU1-97P-201ENST00000516872 164 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AC091178.2-201ENST00000584401 117 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AC002984.1-201ENST00000591692 448 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.23□□□□□ -2.05
HPS3Q969F9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AC242852.1-201ENST00000612151 96 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AL773524.1-201ENST00000614065 229 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 MIR548AY-201ENST00000617669 107 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AC244015.1-201ENST00000622301 99 ntBASIC2.23□□□□□ -2.05
HPS3Q969F9 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 Y_RNA.277-201ENST00000364754 102 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 SNORA72-201ENST00000384339 132 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 Y_RNA.477-201ENST00000384352 108 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 RNA5SP109-201ENST00000391010 116 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 SNORA26.5-201ENST00000391215 123 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 MTCO2P33-201ENST00000402100 465 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 AL445646.1-201ENST00000431784 216 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 RNU7-141P-201ENST00000459304 62 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 RNU6-1023P-201ENST00000516137 106 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 RNU7-115P-201ENST00000516433 55 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 AL358944.1-201ENST00000528537 144 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 MIR3128-201ENST00000581957 66 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 AC006006.1-201ENST00000603082 144 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 AL096840.1-201ENST00000603287 93 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 AC022217.4-201ENST00000604389 163 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 AP003357.1-201ENST00000604497 148 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 snoU18.1-201ENST00000629629 71 ntBASIC2.22□□□□□ -2.05
HPS3Q969F9 SNORD27-201ENST00000363981 72 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 RNU6-1048P-201ENST00000364054 107 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 U8.7-201ENST00000364940 136 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 RNA5SP138-201ENST00000365098 114 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 RNU6-296P-201ENST00000384608 107 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 MT-TG-201ENST00000387429 68 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HPS3Q969F9 MIR764-201ENST00000390811 85 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 Y_RNA.621-201ENST00000411065 96 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 AC244636.1-201ENST00000421152 228 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 AC117454.1-201ENST00000491120 168 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.21□□□□□ -2.06
HPS3Q969F9 Y_RNA.673-201ENST00000516306 88 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 RNU6-1291P-201ENST00000516591 104 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 RNU2-56P-201ENST00000516826 190 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 RNU6-1271P-201ENST00000517049 105 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 RNU6-548P-201ENST00000517083 115 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.21□□□□□ -2.06
HPS3Q969F9 AP002004.2-201ENST00000531656 154 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 AC024405.2-202ENST00000532731 184 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 AC011604.1-201ENST00000545978 196 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 AC134026.1-201ENST00000623249 2239 ntBASIC2.21□□□□□ -2.06
HPS3Q969F9 Y_RNA.20-201ENST00000362479 113 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.82-201ENST00000363000 102 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.92-201ENST00000363043 102 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.117-201ENST00000363294 101 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.235-201ENST00000364412 102 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.306-201ENST00000365015 102 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms