Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNED1Q8TER0 RNU6-324P-201ENST00000363957 106 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 RNU6-804P-201ENST00000384286 107 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 MIR548I2-201ENST00000408348 149 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 RNU6-394P-201ENST00000410735 107 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 RN7SKP101-201ENST00000411376 320 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 AIMP1P2-201ENST00000425294 312 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 AL161788.1-201ENST00000441805 169 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 AL137159.1-201ENST00000452808 512 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 RNU6-1219P-201ENST00000516143 112 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 RNU7-193P-201ENST00000516723 65 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNED1Q8TER0 AC079598.5-201ENST00000547460 117 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 MIR3144-201ENST00000579460 79 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 MIR4308-201ENST00000580634 81 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.95□□□□□ -2.1
SNED1Q8TER0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.94□□□□□ -2.1
SNED1Q8TER0 RNU6-1010P-201ENST00000362757 107 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 Y_RNA.304-201ENST00000365011 112 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 Y_RNA.329-201ENST00000365209 107 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 MIR561-201ENST00000385216 97 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.94□□□□□ -2.1
SNED1Q8TER0 RNU1-123P-201ENST00000458950 160 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 EIF4A1P12-201ENST00000551910 141 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.94□□□□□ -2.1
SNED1Q8TER0 MIR4529-201ENST00000578110 78 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 MIR3618-201ENST00000580330 88 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 DEFB117-201ENST00000602356 141 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.94□□□□□ -2.1
SNED1Q8TER0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNED1Q8TER0 U3.9-201ENST00000363823 204 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 Y_RNA.415-201ENST00000384012 112 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 RNU6-1135P-201ENST00000411083 103 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 BTF3P11-201ENST00000426582 477 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 AC004386.2-201ENST00000441858 148 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 TMSB4XP3-201ENST00000445144 114 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 RNU7-200P-201ENST00000516105 62 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 RNU2-44P-201ENST00000516795 194 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 MTND5P41-201ENST00000517498 206 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.93□□□□□ -2.1
SNED1Q8TER0 AP002001.1-203ENST00000534002 267 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 MIR5006-201ENST00000583027 110 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 AC007229.1-201ENST00000590455 412 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 AC004832.4-201ENST00000608952 331 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 TCL6_2.1-201ENST00000615162 119 ntBASIC1.93□□□□□ -2.1
SNED1Q8TER0 RNU4-15P-201ENST00000362613 141 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 RNU6-653P-201ENST00000363074 106 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 SNORD87-201ENST00000364849 89 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 RNY1P5-201ENST00000383890 115 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 Y_RNA.398-201ENST00000383952 99 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 AL357139.1-201ENST00000407792 426 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 U3.40-201ENST00000408706 208 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 RNA5SP201-201ENST00000410316 124 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 AC112771.1-201ENST00000463581 102 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SNED1Q8TER0 RNU6-436P-201ENST00000516171 114 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.92□□□□□ -2.1
SNED1Q8TER0 SNORD114-26-201ENST00000363543 72 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 Y_RNA.191-201ENST00000363972 113 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU6-704P-201ENST00000364162 103 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU6-454P-201ENST00000364292 107 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 Y_RNA.435-201ENST00000384095 112 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 snoU13.14-201ENST00000459372 104 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 AC145146.1-201ENST00000496370 254 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU6-344P-201ENST00000516635 111 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNA5SP102-201ENST00000516865 106 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU1-117P-201ENST00000517041 158 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU2-12P-201ENST00000517216 168 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 SNORA31.25-201ENST00000517242 134 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 MIR5692C2-201ENST00000577959 77 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 AP001485.1-201ENST00000604799 199 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 SNORD11B-201ENST00000607707 90 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 AL008718.3-201ENST00000610217 321 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 AC005562.2-201ENST00000618264 111 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 AC008555.8-201ENST00000623602 2168 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 AL596028.1-201ENST00000326971 197 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 Y_RNA.7-201ENST00000362352 102 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU6-655P-201ENST00000362858 107 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU6-1210P-201ENST00000363775 107 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 SNORA18.2-201ENST00000383865 132 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU6-1264P-201ENST00000383891 107 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 Y_RNA.571-201ENST00000384753 98 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 MIR186-201ENST00000384988 86 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 MIR17-201ENST00000385012 84 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 MIR95-201ENST00000385072 81 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 EDDM3CP-201ENST00000415977 425 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 U8.19-201ENST00000459095 133 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 Y_RNA.637-201ENST00000459424 114 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 AC015720.1-201ENST00000565251 277 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.91□□□□□ -2.1
SNED1Q8TER0 MIR548AI-201ENST00000579940 88 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms