Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 RNA5SP171-201ENST00000391071 115 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 SNORA11.1-201ENST00000408133 129 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 RNA5SP317-201ENST00000410176 116 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 RNA5SP311-201ENST00000411290 116 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 RNU7-73P-201ENST00000458743 63 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 AC104619.4-201ENST00000510773 249 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 RNA5SP315-201ENST00000516340 116 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 RNA5SP312-201ENST00000517068 116 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 MIR4286-201ENST00000580651 93 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 AC079587.1-201ENST00000603846 277 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 AL020996.3-201ENST00000606617 222 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 MIR4791-201ENST00000607666 84 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
EFCAB3Q8N7B9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 AC007336.1-201ENST00000576365 3828 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 RNU6-315P-201ENST00000362666 107 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 RNA5SP175-201ENST00000364275 119 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 U8.11-201ENST00000384699 133 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 MIR548G-201ENST00000408442 89 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 U8.18-201ENST00000459285 133 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 snoU13.22-201ENST00000459428 104 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 AC140658.3-201ENST00000567603 271 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 MIR3944-201ENST00000581277 108 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 MIR3158-1-201ENST00000583596 81 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 AC113403.1-201ENST00000604910 193 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 RNU6-90P-201ENST00000606352 106 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 uc_338.13-201ENST00000618243 179 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 RNA5SP196-201ENST00000625967 102 ntBASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.12□□□□□ -1.75
EFCAB3Q8N7B9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 RNU6-590P-201ENST00000365039 107 ntBASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 AC003685.2-201ENST00000422795 395 ntBASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 HMGN2P7-201ENST00000456186 273 ntBASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 U3.44-201ENST00000458938 192 ntBASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 SNORA67.7-201ENST00000516664 135 ntBASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.11□□□□□ -1.75
EFCAB3Q8N7B9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 AC005336.3-201ENST00000623833 2679 ntBASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 Z82217.1-201ENST00000625157 8149 ntBASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 MIR34C-201ENST00000384831 77 ntBASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 MIR1262-201ENST00000408276 93 ntBASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 CYCSP19-201ENST00000411715 316 ntBASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 AL162151.2-201ENST00000448875 158 ntBASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 RNU6-826P-201ENST00000516827 104 ntBASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
EFCAB3Q8N7B9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 MIR200C-201ENST00000384980 68 ntBASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 AL034345.1-201ENST00000407768 123 ntBASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 RNU6-613P-201ENST00000410412 108 ntBASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 RNU1-98P-201ENST00000458992 160 ntBASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 MIR3169-201ENST00000578032 83 ntBASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 AC012531.5-201ENST00000611375 151 ntBASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 FAS-AS1.1-201ENST00000615327 126 ntBASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 MIR6075-201ENST00000620782 95 ntBASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 MIR4727-201ENST00000622232 55 ntBASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
EFCAB3Q8N7B9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
EFCAB3Q8N7B9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
EFCAB3Q8N7B9 AP001486.2-201ENST00000561652 5113 ntBASIC4.08□□□□□ -1.76
EFCAB3Q8N7B9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
EFCAB3Q8N7B9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.08□□□□□ -1.76
EFCAB3Q8N7B9 MIR452-201ENST00000385020 85 ntBASIC4.08□□□□□ -1.76
EFCAB3Q8N7B9 SNORA11F-201ENST00000408237 128 ntBASIC4.08□□□□□ -1.76
EFCAB3Q8N7B9 SNORA3C-201ENST00000408792 125 ntBASIC4.08□□□□□ -1.76
EFCAB3Q8N7B9 RNU6-1190P-201ENST00000410811 104 ntBASIC4.08□□□□□ -1.76
EFCAB3Q8N7B9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
EFCAB3Q8N7B9 RN7SL542P-201ENST00000467147 294 ntBASIC4.08□□□□□ -1.76
EFCAB3Q8N7B9 AC114801.3-201ENST00000510231 177 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms