Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNU6-574P-201ENST00000384265 107 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.562-201ENST00000384695 113 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS52Q8N1B4 SNORD13-201ENST00000459299 104 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 RNU6-1278P-201ENST00000516130 107 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 AC084364.2-201ENST00000546924 395 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 AC004817.2-201ENST00000561794 651 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 MIR3683-201ENST00000580847 82 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 AC037487.3-201ENST00000606668 112 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 MIR8081-201ENST00000611533 95 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 RNU6-112P-201ENST00000363599 104 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 RNU6-702P-201ENST00000364982 107 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 SNORD116-13-201ENST00000384408 92 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 SNORA8-201ENST00000384574 139 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 AL627390.1-201ENST00000396055 340 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 RNA5SP100-201ENST00000410903 110 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 RNA5SP59-201ENST00000410922 110 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 AC244636.1-201ENST00000421152 228 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 AC010409.1-201ENST00000487382 476 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 AC091959.1-201ENST00000495857 238 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 AL163195.1-201ENST00000496941 348 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 AC004832.4-201ENST00000608952 331 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.97□□□□□ -2.09
VPS52Q8N1B4 SNORA25.1-201ENST00000362326 128 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RNU6-457P-201ENST00000363999 107 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 Y_RNA.341-201ENST00000365341 102 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RNU6-296P-201ENST00000384608 107 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RNA5SP323-201ENST00000391094 133 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RNU11-5P-201ENST00000391216 129 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RNA5SP212-201ENST00000391223 107 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RNU6-855P-201ENST00000410395 104 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RNU2-38P-201ENST00000410856 79 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RNA5SP247-201ENST00000411181 105 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 AL162725.1-201ENST00000435405 301 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 AC069257.2-201ENST00000441819 155 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RPS27P1-201ENST00000450552 247 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RPS20P10-201ENST00000451209 253 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 AC136628.3-201ENST00000521868 290 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 AC015720.1-201ENST00000565251 277 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 AC091178.2-201ENST00000584401 117 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 AC073413.2-201ENST00000604332 360 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS52Q8N1B4 AL078604.3-201ENST00000615580 211 ntBASIC1.96□□□□□ -2.1
VPS52Q8N1B4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS52Q8N1B4 AC018630.2-201ENST00000534866 2403 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 Y_RNA.14-201ENST00000362415 103 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 RNU6-801P-201ENST00000364087 105 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 RNU6-514P-201ENST00000384208 107 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 AC009310.1-201ENST00000414414 451 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS52Q8N1B4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS52Q8N1B4 RNU6-1132P-201ENST00000459214 107 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 RPS29P11-201ENST00000496507 171 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 AC107393.1-201ENST00000512403 346 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 SNORA27.4-201ENST00000516650 95 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 RNU6-63P-201ENST00000516690 95 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 RPL21P9-201ENST00000556149 474 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 AC010900.2-201ENST00000604508 210 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 AC062037.2-201ENST00000610137 73 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 U2.14-201ENST00000615943 113 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.95□□□□□ -2.1
VPS52Q8N1B4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VPS52Q8N1B4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
VPS52Q8N1B4 MIR378A-201ENST00000362177 66 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 Y_RNA.217-201ENST00000364214 105 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 RNA5SP511-201ENST00000410487 115 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 Y_RNA.641-201ENST00000459414 105 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 RNU7-94P-201ENST00000459576 63 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 RNU6-250P-201ENST00000516958 103 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 SCARNA24.2-201ENST00000516968 130 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 AC012433.1-201ENST00000588916 398 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.94□□□□□ -2.1
VPS52Q8N1B4 AC022217.4-201ENST00000604389 163 ntBASIC1.94□□□□□ -2.1
VPS52Q8N1B4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
VPS52Q8N1B4 Y_RNA.275-201ENST00000364726 110 ntBASIC1.93□□□□□ -2.1
VPS52Q8N1B4 Y_RNA.352-201ENST00000365439 102 ntBASIC1.93□□□□□ -2.1
VPS52Q8N1B4 RNU6-1323P-201ENST00000384025 107 ntBASIC1.93□□□□□ -2.1
VPS52Q8N1B4 RNU6-376P-201ENST00000384731 106 ntBASIC1.93□□□□□ -2.1
VPS52Q8N1B4 MIR520A-201ENST00000384862 85 ntBASIC1.93□□□□□ -2.1
VPS52Q8N1B4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
VPS52Q8N1B4 AC022254.1-201ENST00000567857 235 ntBASIC1.93□□□□□ -2.1
VPS52Q8N1B4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS52Q8N1B4 AL512605.2-201ENST00000592972 256 ntBASIC1.93□□□□□ -2.1
VPS52Q8N1B4 AC005972.2-201ENST00000604690 348 ntBASIC1.93□□□□□ -2.1
VPS52Q8N1B4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS52Q8N1B4 MIR6079-201ENST00000635807 62 ntBASIC1.93□□□□□ -2.1
VPS52Q8N1B4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
VPS52Q8N1B4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS52Q8N1B4 Y_RNA.44-201ENST00000362676 108 ntBASIC1.92□□□□□ -2.1
VPS52Q8N1B4 SNORA72.4-201ENST00000384174 132 ntBASIC1.92□□□□□ -2.1
VPS52Q8N1B4 MIR520G-201ENST00000385064 90 ntBASIC1.92□□□□□ -2.1
VPS52Q8N1B4 AL606517.2-201ENST00000442855 241 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms