Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC106754.2-201ENST00000623006 233 ntBASIC1.1□□□□□ -2.23
C9orf40Q8IXQ3 AC005592.1-201ENST00000566527 1640 ntBASIC1.1□□□□□ -2.23
C9orf40Q8IXQ3 MIR26B-201ENST00000362251 77 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 RNU4-76P-201ENST00000364509 141 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 Y_RNA.419-201ENST00000384041 102 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 Y_RNA.458-201ENST00000384240 102 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 RNU6-424P-201ENST00000384367 105 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 SNORD116-13-201ENST00000384408 92 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 Y_RNA.526-201ENST00000384572 110 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 U8.16-201ENST00000391279 133 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 RPL39P38-201ENST00000467018 153 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 AL358944.1-201ENST00000528537 144 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 AL121655.1-201ENST00000605811 308 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 uc_338.22-201ENST00000622722 187 ntBASIC1.09□□□□□ -2.23
C9orf40Q8IXQ3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.09□□□□□ -2.24
C9orf40Q8IXQ3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 MIR369-201ENST00000362155 70 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 RNU5E-4P-201ENST00000364931 120 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-867P-201ENST00000364956 107 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 AL390729.2-201ENST00000416137 156 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 RPS4XP11-201ENST00000446897 772 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 AC005042.3-201ENST00000453230 174 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 AC092991.1-201ENST00000477176 376 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 AC093852.1-201ENST00000503587 266 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 CYP3A52P-201ENST00000563326 91 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 MIR4423-201ENST00000580922 80 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 AC007485.1-201ENST00000616755 206 ntBASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-199P-201ENST00000362954 107 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 RNU4-41P-201ENST00000364426 143 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.329-201ENST00000365209 107 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.395-201ENST00000383945 109 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.439-201ENST00000384119 94 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.462-201ENST00000384268 102 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.509-201ENST00000384506 99 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 MCFD2P1-201ENST00000417812 300 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 U8.20-201ENST00000459445 131 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 RPL30P7-201ENST00000479312 323 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 RNU7-12P-201ENST00000516030 62 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 AC040926.1-201ENST00000530195 238 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 MIR3664-201ENST00000579074 99 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 AL050343.2-201ENST00000607338 280 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 AC090971.5-201ENST00000621102 293 ntBASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
C9orf40Q8IXQ3 RNU4-50P-201ENST00000364361 141 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.331-201ENST00000365267 102 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 SNORD42.2-201ENST00000365570 69 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 SNORD14.1-201ENST00000365609 90 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 SNORD26-201ENST00000384147 75 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 Z98949.2-201ENST00000440996 144 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 AC093850.1-201ENST00000454121 251 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-475P-201ENST00000516073 104 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 RN7SKP88-201ENST00000516847 250 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.713-201ENST00000517013 96 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 C8orf59P2-201ENST00000603441 271 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 AC011373.1-201ENST00000607270 237 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 AC004832.4-201ENST00000608952 331 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 7SK.8-201ENST00000612110 250 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 7SK.11-201ENST00000615477 250 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 7SK.13-201ENST00000622040 250 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 AC091895.1-201ENST00000624494 256 ntBASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.06□□□□□ -2.24
C9orf40Q8IXQ3 MIRLET7C-201ENST00000362160 84 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.813-201ENST00000364639 102 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.445-201ENST00000384168 102 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.471-201ENST00000384312 102 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-308P-201ENST00000390957 107 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 MIR1302-11-201ENST00000408051 138 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 MIR1302-9-201ENST00000408365 138 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 MIR1302-10-201ENST00000408734 138 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-710P-201ENST00000410424 105 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.639-201ENST00000458981 102 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-922P-201ENST00000516753 99 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 RNU7-110P-201ENST00000516891 62 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 AC011604.1-201ENST00000545978 196 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 AL513534.2-201ENST00000603836 250 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 MIR1302-2-201ENST00000607096 138 ntBASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
C9orf40Q8IXQ3 SNORD68-201ENST00000363214 84 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 RNY1P10-201ENST00000363268 113 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.143-201ENST00000363520 106 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.424-201ENST00000384063 103 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-937P-201ENST00000384325 106 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-1105P-201ENST00000384774 107 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 288.9 ms