Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC011373.1-201ENST00000607270 237 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 SNORD114-7-201ENST00000362520 77 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 SNORA1B-201ENST00000362535 133 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.128-201ENST00000363391 112 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 RNA5SP259-201ENST00000365541 109 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 SNORD116-13-201ENST00000384408 92 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 MIR194-1-201ENST00000384892 85 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 SNORA12.1-201ENST00000390873 148 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 RNU4-30P-201ENST00000410245 143 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 RNU5A-5P-201ENST00000411054 116 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 RNU6-341P-201ENST00000516973 96 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 AC091178.2-201ENST00000584401 117 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 MIR6078-201ENST00000611069 100 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 PART1_1.1-201ENST00000611761 217 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 AC040896.1-201ENST00000613819 479 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 AC134503.1-201ENST00000633048 54 ntBASIC1.39□□□□□ -2.19
CCDC60Q8IWA6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.216-201ENST00000364205 93 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 SNORD1A-201ENST00000364968 72 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 SNORA22B-201ENST00000383876 138 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.389-201ENST00000383924 113 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.462-201ENST00000384268 102 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 RNU6-21P-201ENST00000384710 107 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 MIR562-201ENST00000384894 95 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 MIR520G-201ENST00000385064 90 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.645-201ENST00000391229 102 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 MIR548P-201ENST00000408336 84 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 RNU6-130P-201ENST00000411112 103 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 AL354751.2-201ENST00000415471 210 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 PGBD4P5-201ENST00000445958 426 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 AC079140.2-201ENST00000506193 142 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.713-201ENST00000517013 96 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 SUMO2P16-201ENST00000519475 264 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 AP002004.2-201ENST00000531656 154 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 AC015688.6-201ENST00000577737 104 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 MIR4423-201ENST00000580922 80 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 PRR13P7-201ENST00000605538 430 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 SNORA28-201ENST00000606769 126 ntBASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC60Q8IWA6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 MIR302D-201ENST00000362275 68 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.172-201ENST00000363765 102 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.551-201ENST00000384661 102 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 RNU6-101P-201ENST00000410323 104 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 RNU2-61P-201ENST00000411069 191 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 AL390729.2-201ENST00000416137 156 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 HSPE1P13-201ENST00000451143 297 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 RNU6-1046P-201ENST00000516538 107 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 MIR3171-201ENST00000584270 74 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 AL162424.1-201ENST00000602325 221 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 AC104695.3-201ENST00000604052 296 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 AC073349.3-201ENST00000617616 186 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 SNORD3E-202ENST00000627253 216 ntBASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CCDC60Q8IWA6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 RNU6-823P-201ENST00000391042 103 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 RNU6-855P-201ENST00000410395 104 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 AL162725.1-201ENST00000435405 301 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 HMGN1P7-201ENST00000491722 313 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 RNA5SP445-201ENST00000515889 115 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.711-201ENST00000516993 102 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.715-201ENST00000517082 110 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 MIR4778-201ENST00000577635 80 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 MIR3145-201ENST00000580727 82 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 DEFB117-201ENST00000602356 141 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC60Q8IWA6 CALM2P4-201ENST00000430810 426 ntBASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 AL135790.2-201ENST00000437701 267 ntBASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 RPS4XP11-201ENST00000446897 772 ntBASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 AL049830.1-201ENST00000468034 425 ntBASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 AC022616.4-201ENST00000522985 181 ntBASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 AC136932.1-201ENST00000574771 208 ntBASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 AL365434.2-201ENST00000607979 234 ntBASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 AC004832.4-201ENST00000608952 331 ntBASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 AC106754.2-201ENST00000623006 233 ntBASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC60Q8IWA6 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 SNORD81.1-201ENST00000363064 77 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms