Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
BHLHA9Q7RTU4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BHLHA9Q7RTU4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 Y_RNA.243-201ENST00000364481 109 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 Y_RNA.341-201ENST00000365341 102 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 Y_RNA.415-201ENST00000384012 112 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-1310P-201ENST00000384153 107 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 Y_RNA.456-201ENST00000384232 111 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-793P-201ENST00000384233 104 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-1113P-201ENST00000384348 107 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-24P-201ENST00000384440 107 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 MT-TI-201ENST00000387365 69 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 AC004866.1-201ENST00000411748 78 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 AC092047.1-201ENST00000424997 240 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 AC007919.1-201ENST00000429380 217 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 AC007969.2-201ENST00000441891 191 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 AL021397.1-201ENST00000451806 248 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 RNU2-13P-201ENST00000515909 113 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 RNA5SP236-201ENST00000516169 116 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-572P-201ENST00000516724 80 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-826P-201ENST00000516827 104 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 RNA5SP291-201ENST00000517222 105 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 AC105137.2-201ENST00000569073 466 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 AL021707.8-201ENST00000609428 183 ntBASIC2.36□□□□□ -2.03
BHLHA9Q7RTU4 AC026241.1-201ENST00000517873 2142 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 MIR302B-201ENST00000362188 73 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 SNORD56.5-201ENST00000364281 72 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-675P-201ENST00000384236 104 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 MIR891A-201ENST00000401237 79 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 RN7SKP223-201ENST00000410582 62 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 RNA5SP504-201ENST00000410676 117 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 RNA5SP508-201ENST00000411327 119 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 AC007215.1-201ENST00000464893 276 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 AC090515.1-201ENST00000465295 476 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 CYCSP23-201ENST00000519781 313 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 AC009163.5-201ENST00000575421 637 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 MIR5009-201ENST00000578736 100 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 MIR5588-201ENST00000581890 63 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 AL138963.2-201ENST00000605137 226 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 U4atac.1-201ENST00000618345 95 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
BHLHA9Q7RTU4 MIR367-201ENST00000362299 68 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 Y_RNA.78-201ENST00000362970 110 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 Y_RNA.91-201ENST00000363042 107 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RNY1P1-201ENST00000364372 112 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 Y_RNA.362-201ENST00000365518 110 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-144P-201ENST00000383951 107 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RNU1-138P-201ENST00000384093 164 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 MIR518D-201ENST00000385014 87 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 MIR889-201ENST00000401280 79 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RNA5SP181-201ENST00000410246 98 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-855P-201ENST00000410395 104 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RNA5SP475-201ENST00000410568 110 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AC007064.1-201ENST00000412238 351 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RPS26P42-201ENST00000413485 326 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AL078601.1-201ENST00000444542 271 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RPL31P41-201ENST00000477967 372 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AC117454.1-201ENST00000491120 168 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RNU6-267P-201ENST00000516714 103 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 RNU1-104P-201ENST00000517280 175 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AC022254.1-201ENST00000567857 235 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 MIR3945-201ENST00000581853 98 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AC006380.1-201ENST00000603598 186 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AC013412.1-201ENST00000610687 192 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 U6.115-201ENST00000636045 103 ntBASIC2.34□□□□□ -2.03
BHLHA9Q7RTU4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.34□□□□□ -2.04
BHLHA9Q7RTU4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 AC004944.1-201ENST00000517807 3059 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 RNU1-72P-201ENST00000362976 153 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.93-201ENST00000363066 109 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-527P-201ENST00000363425 104 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-217P-201ENST00000384164 104 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 RN7SKP101-201ENST00000411376 320 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 RNU7-171P-201ENST00000459581 62 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 RPS20P22-201ENST00000473700 357 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-1198P-201ENST00000516904 67 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 RNA5SP54-201ENST00000516951 92 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 AC068339.1-201ENST00000526965 141 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 AC021231.3-201ENST00000558497 370 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 AC007229.1-201ENST00000590455 412 ntBASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.33□□□□□ -2.04
BHLHA9Q7RTU4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms