Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 RNU7-94P-201ENST00000459576 63 ntBASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-56P-201ENST00000516986 93 ntBASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-1096P-201ENST00000517089 102 ntBASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 RNU7-128P-201ENST00000517247 62 ntBASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 MIR4635-201ENST00000583759 79 ntBASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 AC073413.2-201ENST00000604332 360 ntBASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 SNORD56.5-201ENST00000364281 72 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 Y_RNA.343-201ENST00000365354 112 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 MIR504-201ENST00000385065 83 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP320-201ENST00000516263 124 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP282-201ENST00000516355 108 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP24-201ENST00000516478 95 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-126P-201ENST00000516685 103 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 AL160236.1-201ENST00000556317 195 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 SNORD53-201ENST00000579969 78 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 AC091178.2-201ENST00000584401 117 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 DNAJC19P2-201ENST00000593340 302 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 AL929325.1-201ENST00000603096 117 ntBASIC2.89□□□□□ -1.95
RUFY4Q6ZNE9 U8.2-201ENST00000363156 134 ntBASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP493-201ENST00000364115 91 ntBASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 SNORA79-201ENST00000408376 140 ntBASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 RPS26P45-201ENST00000471748 340 ntBASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-346P-201ENST00000516288 111 ntBASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-341P-201ENST00000516973 96 ntBASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 MIR7843-201ENST00000622274 79 ntBASIC2.88□□□□□ -1.95
RUFY4Q6ZNE9 SNORA38-201ENST00000363946 132 ntBASIC2.87□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.87□□□□□ -1.95
RUFY4Q6ZNE9 SNORD113-1-201ENST00000365321 69 ntBASIC2.87□□□□□ -1.95
RUFY4Q6ZNE9 Y_RNA.488-201ENST00000384403 102 ntBASIC2.87□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP467-201ENST00000391274 118 ntBASIC2.87□□□□□ -1.95
RUFY4Q6ZNE9 snoU13.26-201ENST00000459452 105 ntBASIC2.87□□□□□ -1.95
RUFY4Q6ZNE9 MIR3646-201ENST00000578301 84 ntBASIC2.87□□□□□ -1.95
RUFY4Q6ZNE9 AP006437.1-201ENST00000641440 3685 ntBASIC2.87□□□□□ -1.95
RUFY4Q6ZNE9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.87□□□□□ -1.95
RUFY4Q6ZNE9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 AL157777.2-201ENST00000258070 137 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP289-201ENST00000362332 137 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 SNORA25.6-201ENST00000364121 118 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 Y_RNA.215-201ENST00000364204 112 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 DEFA7P-201ENST00000382676 285 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 Y_RNA.587-201ENST00000391210 103 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 RNU7-26P-201ENST00000458980 63 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP137-201ENST00000516833 135 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 MIR3169-201ENST00000578032 83 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 MIR6079-201ENST00000635807 62 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 U6.108-201ENST00000637764 58 ntBASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RUFY4Q6ZNE9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 ZNF271P-202ENST00000465539 1970 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-23P-201ENST00000363283 107 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-151P-201ENST00000364158 107 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP323-201ENST00000391094 133 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 RN7SKP192-201ENST00000411291 327 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 AC006461.1-201ENST00000412637 326 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 SNRPGP8-201ENST00000454064 226 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 MIR3126-201ENST00000577443 74 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 AC005786.1-201ENST00000588553 154 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 JPX_2.1-201ENST00000614161 69 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 uc_338.4-201ENST00000616635 176 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 AC010297.1-201ENST00000623948 149 ntBASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RUFY4Q6ZNE9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 RNU1-58P-201ENST00000362413 163 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 SNORD45.3-201ENST00000363836 72 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 Y_RNA.796-201ENST00000364268 102 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 Y_RNA.799-201ENST00000364992 102 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 SNORA11.4-201ENST00000408823 129 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP492-201ENST00000411330 114 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 SNORD11-201ENST00000459124 84 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 RNU1-41P-201ENST00000516161 162 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-561P-201ENST00000516222 102 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 RNU1-48P-201ENST00000516400 162 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 RNA5SP153-201ENST00000516498 76 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 SNORD116-25-201ENST00000516517 92 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 RPL23AP91-201ENST00000569211 455 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 MIR4662B-201ENST00000579498 81 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 MIR548X2-201ENST00000579776 100 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 CTSLP2-204ENST00000629029 392 ntBASIC2.84□□□□□ -1.95
RUFY4Q6ZNE9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.84□□□□□ -1.96
RUFY4Q6ZNE9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 MIR6073-201ENST00000352083 89 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-1209P-201ENST00000363655 107 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 Y_RNA.242-201ENST00000364473 110 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-81P-201ENST00000365608 104 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 Y_RNA.432-201ENST00000384087 111 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms