Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 Y_RNA.376-201ENST00000365638 108 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 Y_RNA.512-201ENST00000384518 102 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 MIR562-201ENST00000384894 95 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 MIR568-201ENST00000385036 95 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 MTND3P2-201ENST00000438452 342 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-191P-201ENST00000516295 94 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-1338P-201ENST00000516328 91 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 RNU2-31P-201ENST00000516954 155 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-548P-201ENST00000517083 115 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 AC008269.2-201ENST00000561915 1105 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 MIR3145-201ENST00000580727 82 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 UBE2WP1-201ENST00000362030 340 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-376P-201ENST00000384731 106 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 MT-TW-201ENST00000387382 68 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-360P-201ENST00000390944 104 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 AC091021.1-201ENST00000468051 388 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 TRBVB-201ENST00000477100 408 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 AC108210.2-201ENST00000503681 201 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 SERF1AP1-201ENST00000514575 187 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 CBX3P4-201ENST00000538909 354 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 RPL21P9-201ENST00000556149 474 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 AC103810.8-201ENST00000607347 118 ntBASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.92□□□□□ -2.1
SYNE3Q6ZMZ3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-950P-201ENST00000384651 107 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 SNORA12.1-201ENST00000390873 148 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 RNA5SP109-201ENST00000391010 116 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 SNORA53-201ENST00000391141 249 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-855P-201ENST00000410395 104 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 RNA5SP511-201ENST00000410487 115 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 HSPE1P9-201ENST00000440046 311 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 HMGN2P23-201ENST00000456759 269 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 SNORA31.10-201ENST00000516482 106 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-63P-201ENST00000516690 95 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 AC136628.3-201ENST00000521868 290 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 MIR3683-201ENST00000580847 82 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 AL162730.1-201ENST00000605734 292 ntBASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.91□□□□□ -2.1
SYNE3Q6ZMZ3 AC100821.1-201ENST00000523153 2479 ntBASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.16-201ENST00000362421 102 ntBASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 RN7SKP101-201ENST00000411376 320 ntBASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 AC245047.3-201ENST00000429428 127 ntBASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 RPS4XP11-201ENST00000446897 772 ntBASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 AC015712.3-201ENST00000559380 164 ntBASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 MIR4769-201ENST00000584126 77 ntBASIC1.9□□□□□ -2.11
SYNE3Q6ZMZ3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 SNORA4.2-201ENST00000365313 147 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.341-201ENST00000365341 102 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.461-201ENST00000384263 103 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.483-201ENST00000384380 101 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.556-201ENST00000384677 113 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 snosnR66.1-201ENST00000391095 99 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 AL161935.2-201ENST00000414627 60 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.668-201ENST00000516233 93 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 AC005972.2-201ENST00000604690 348 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 MIR8054-201ENST00000620877 86 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 U6.104-201ENST00000637979 90 ntBASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.89□□□□□ -2.11
SYNE3Q6ZMZ3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6-801P-201ENST00000364087 105 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.217-201ENST00000364214 105 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 RNA5SP190-201ENST00000365222 118 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.396-201ENST00000383949 103 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 SNORA72.4-201ENST00000384174 132 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 AC104332.1-201ENST00000440471 797 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.641-201ENST00000459414 105 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 AC091959.1-201ENST00000495857 238 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6-570P-201ENST00000517051 105 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 AP003357.1-201ENST00000604497 148 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 AC037487.3-201ENST00000606668 112 ntBASIC1.88□□□□□ -2.11
SYNE3Q6ZMZ3 AC245060.5-201ENST00000610778 3293 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6-238P-201ENST00000363313 106 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 RNA5SP363-201ENST00000365072 115 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 MIR194-1-201ENST00000384892 85 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6-482P-201ENST00000391068 107 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 MIR1302-6-201ENST00000408466 90 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 AC099513.1-201ENST00000490423 301 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 RNU7-116P-201ENST00000516940 62 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 AP002004.2-201ENST00000531656 154 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE3Q6ZMZ3 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms