Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC003982.1-202ENST00000469928 248 ntBASIC2.9□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-237P-201ENST00000515985 71 ntBASIC2.9□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.694-201ENST00000516677 117 ntBASIC2.9□□□□□ -1.95
CNKSR3Q6P9H4 AC109329.2-201ENST00000519658 482 ntBASIC2.9□□□□□ -1.95
CNKSR3Q6P9H4 AL356280.1-201ENST00000603614 379 ntBASIC2.9□□□□□ -1.95
CNKSR3Q6P9H4 uc_338.4-201ENST00000616635 176 ntBASIC2.9□□□□□ -1.95
CNKSR3Q6P9H4 AL121890.5-201ENST00000620848 304 ntBASIC2.9□□□□□ -1.95
CNKSR3Q6P9H4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CNKSR3Q6P9H4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-647P-201ENST00000364243 107 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 MIR181A2-201ENST00000384863 110 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 FO393413.1-201ENST00000402892 195 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 SNORA3.2-201ENST00000408221 125 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 AC092427.1-202ENST00000430569 476 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 AL445687.1-201ENST00000439946 251 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 AC245102.2-201ENST00000448956 180 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 SNORD11-201ENST00000459124 84 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 RNA5SP385-201ENST00000515947 110 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 IGKV1-22-201ENST00000524313 326 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 RPL23AP91-201ENST00000569211 455 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 MIR4753-201ENST00000585119 83 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 MIR7843-201ENST00000622274 79 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 AL355596.1-201ENST00000565399 3996 ntBASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.89□□□□□ -1.95
CNKSR3Q6P9H4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-944P-201ENST00000364023 107 ntBASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 SNORA72-201ENST00000384339 132 ntBASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 RNU2-70P-201ENST00000410718 179 ntBASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 AC016909.1-201ENST00000415916 166 ntBASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.649-201ENST00000459077 103 ntBASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 AC025647.1-201ENST00000517879 253 ntBASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 AC024614.2-201ENST00000577584 372 ntBASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CNKSR3Q6P9H4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.52-201ENST00000362760 96 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 SNORD56.5-201ENST00000364281 72 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 SNORD18B-201ENST00000365659 72 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-880P-201ENST00000384526 107 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 MIR592-201ENST00000384959 97 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 MIR29B2-201ENST00000385055 81 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 MIR504-201ENST00000385065 83 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 RN7SKP192-201ENST00000411291 327 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 CKS1BP2-201ENST00000497342 240 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 uc_338.28-201ENST00000612082 187 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 AC025166.1-201ENST00000612411 163 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 MIR5739-201ENST00000619803 80 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 AC090517.3-201ENST00000625170 141 ntBASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CNKSR3Q6P9H4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.116-201ENST00000363292 103 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 RNU4-13P-201ENST00000364019 141 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-234P-201ENST00000365229 104 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-32P-201ENST00000383948 107 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-418P-201ENST00000384035 107 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-13P-201ENST00000384248 107 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-12P-201ENST00000384604 107 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-41P-201ENST00000384741 107 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 AC009969.1-201ENST00000438726 172 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 RPS4XP11-201ENST00000446897 772 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 MIR4506-201ENST00000584693 77 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 AL022345.2-201ENST00000606307 135 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 AL449363.1-201ENST00000617815 186 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 MTND5P18-201ENST00000445624 1801 ntBASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.86□□□□□ -1.95
CNKSR3Q6P9H4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.369-201ENST00000365568 117 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 U8.9-201ENST00000365667 134 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 RNU6-220P-201ENST00000390919 107 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 MIR891A-201ENST00000401237 79 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 MIR1294-201ENST00000408503 142 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 AL031737.1-201ENST00000450125 223 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 AC007751.1-201ENST00000529260 376 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 MIR3605-201ENST00000583214 100 ntBASIC2.85□□□□□ -1.95
CNKSR3Q6P9H4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.66-201ENST00000362862 102 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 SNORD31B-201ENST00000364977 69 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.346-201ENST00000365385 112 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 Y_RNA.486-201ENST00000384398 107 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 260.3 ms