Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MIR548H3-201ENST00000408771 118 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 RPL23AP54-201ENST00000495129 419 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 AC127455.1-201ENST00000565496 145 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
RNF220Q5VTB9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RNF220Q5VTB9 RNU6-1080P-201ENST00000383982 107 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 RNU6-1289P-201ENST00000384431 106 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 SNORA67.4-201ENST00000384688 142 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 BTF3P11-201ENST00000426582 477 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 UBE2DNL-203ENST00000474922 222 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 snoU18.1-201ENST00000629629 71 ntBASIC2.05□□□□□ -2.08
RNF220Q5VTB9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RNF220Q5VTB9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RNF220Q5VTB9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.05□□□□□ -2.08
RNF220Q5VTB9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RNF220Q5VTB9 RNU6-740P-201ENST00000364734 105 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.350-201ENST00000365409 98 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 RNU6-144P-201ENST00000383951 107 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 RNA5SP482-201ENST00000391269 118 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 AL603910.2-201ENST00000407268 136 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 SNORA36B-201ENST00000410438 131 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.04□□□□□ -2.08
RNF220Q5VTB9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.04□□□□□ -2.08
RNF220Q5VTB9 STAG3L5P-204ENST00000443759 179 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 MIR5692C2-201ENST00000577959 77 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 AC013791.1-201ENST00000616619 62 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.117-201ENST00000363294 101 ntBASIC2.03□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.03□□□□□ -2.08
RNF220Q5VTB9 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
RNF220Q5VTB9 RNA5SP281-201ENST00000516504 135 ntBASIC2.03□□□□□ -2.08
RNF220Q5VTB9 SNORA44.1-201ENST00000517031 108 ntBASIC2.03□□□□□ -2.08
RNF220Q5VTB9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.03□□□□□ -2.08
RNF220Q5VTB9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.03□□□□□ -2.08
RNF220Q5VTB9 AC012493.3-201ENST00000604494 112 ntBASIC2.03□□□□□ -2.08
RNF220Q5VTB9 MIR8074-201ENST00000615081 81 ntBASIC2.03□□□□□ -2.08
RNF220Q5VTB9 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
RNF220Q5VTB9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.54-201ENST00000362766 105 ntBASIC2.02□□□□□ -2.09
RNF220Q5VTB9 RNU6-1205P-201ENST00000363625 106 ntBASIC2.02□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.416-201ENST00000384014 113 ntBASIC2.02□□□□□ -2.09
RNF220Q5VTB9 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
RNF220Q5VTB9 MIR221-201ENST00000385135 110 ntBASIC2.02□□□□□ -2.09
RNF220Q5VTB9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RNF220Q5VTB9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RNF220Q5VTB9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.02□□□□□ -2.09
RNF220Q5VTB9 JTBP1-201ENST00000441314 247 ntBASIC2.02□□□□□ -2.09
RNF220Q5VTB9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.02□□□□□ -2.09
RNF220Q5VTB9 BX284668.6-201ENST00000606899 438 ntBASIC2.02□□□□□ -2.09
RNF220Q5VTB9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RNF220Q5VTB9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RNF220Q5VTB9 RNA5SP289-201ENST00000362332 137 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.82-201ENST00000363000 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.92-201ENST00000363043 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.235-201ENST00000364412 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.306-201ENST00000365015 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.312-201ENST00000365089 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.322-201ENST00000365151 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.478-201ENST00000384358 107 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 MIR1267-201ENST00000408723 78 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.590-201ENST00000410140 107 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.650-201ENST00000459002 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 RNU6-437P-201ENST00000459408 95 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 OR9P1P-201ENST00000496431 281 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.777-201ENST00000516982 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.01□□□□□ -2.09
RNF220Q5VTB9 MIR4513-201ENST00000581077 86 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.771-201ENST00000598668 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 AL008718.3-201ENST00000610217 321 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 AC021506.2-201ENST00000612354 169 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.789-201ENST00000622480 102 ntBASIC2.01□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.203-201ENST00000364106 102 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 RNU4-41P-201ENST00000364426 143 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.277-201ENST00000364754 102 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.401-201ENST00000383965 117 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 RNU6-211P-201ENST00000384047 107 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 RN7SKP192-201ENST00000411291 327 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 Z98949.2-201ENST00000440996 144 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.679-201ENST00000516416 91 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 MIR4672-201ENST00000583126 81 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 AC005357.1-201ENST00000588399 301 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 AC073349.3-201ENST00000617616 186 ntBASIC2□□□□□ -2.09
RNF220Q5VTB9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF220Q5VTB9 RNU6-674P-201ENST00000363831 107 ntBASIC1.99□□□□□ -2.09
RNF220Q5VTB9 MIR30A-201ENST00000385092 71 ntBASIC1.99□□□□□ -2.09
RNF220Q5VTB9 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
RNF220Q5VTB9 HMGN1P7-201ENST00000491722 313 ntBASIC1.99□□□□□ -2.09
RNF220Q5VTB9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF220Q5VTB9 RPL23AP94-201ENST00000512518 302 ntBASIC1.99□□□□□ -2.09
RNF220Q5VTB9 MIR2681-201ENST00000581814 105 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms