Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC5.65□□□□□ -1.5
NCBP3Q53F19 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.65□□□□□ -1.5
NCBP3Q53F19 MIR4277-201ENST00000578298 84 ntBASIC5.65□□□□□ -1.5
NCBP3Q53F19 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.65□□□□□ -1.51
NCBP3Q53F19 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
NCBP3Q53F19 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NCBP3Q53F19 RNA5SP509-201ENST00000364577 119 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 SNORD21-201ENST00000383953 95 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 RNU6-411P-201ENST00000384451 107 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 MIR452-201ENST00000385020 85 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 SNORD28B-201ENST00000390993 75 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 AC011998.1-201ENST00000433403 117 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 RNU6-871P-201ENST00000516122 100 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 MIR548AR-201ENST00000582191 57 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 MIR432-201ENST00000606207 94 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.64□□□□□ -1.51
NCBP3Q53F19 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.64□□□□□ -1.51
NCBP3Q53F19 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NCBP3Q53F19 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NCBP3Q53F19 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NCBP3Q53F19 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NCBP3Q53F19 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NCBP3Q53F19 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.64□□□□□ -1.51
NCBP3Q53F19 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
NCBP3Q53F19 AC092435.3-201ENST00000565538 3654 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCBP3Q53F19 RNU1-14P-201ENST00000362759 152 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 RNA5SP366-201ENST00000365454 123 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 SNORA40.18-201ENST00000391200 128 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 SNORA48.8-201ENST00000391324 134 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 RNU6-380P-201ENST00000410207 107 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 RNA5SP246-201ENST00000458909 119 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 snoU13.11-201ENST00000459219 104 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 AC104619.4-201ENST00000510773 249 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 PARP1P2-201ENST00000556806 195 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 SNORA50A-202ENST00000629536 136 ntBASIC5.63□□□□□ -1.51
NCBP3Q53F19 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NCBP3Q53F19 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NCBP3Q53F19 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NCBP3Q53F19 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
NCBP3Q53F19 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.62□□□□□ -1.51
NCBP3Q53F19 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NCBP3Q53F19 Y_RNA.98-201ENST00000363109 102 ntBASIC5.62□□□□□ -1.51
NCBP3Q53F19 RNU6-23P-201ENST00000363283 107 ntBASIC5.62□□□□□ -1.51
NCBP3Q53F19 AL034345.1-201ENST00000407768 123 ntBASIC5.62□□□□□ -1.51
NCBP3Q53F19 RNU7-48P-201ENST00000458875 63 ntBASIC5.62□□□□□ -1.51
NCBP3Q53F19 MIR3169-201ENST00000578032 83 ntBASIC5.62□□□□□ -1.51
NCBP3Q53F19 MIR5195-201ENST00000583555 115 ntBASIC5.62□□□□□ -1.51
NCBP3Q53F19 PLD1-217ENST00000627725 174 ntTSL 5 BASIC5.62□□□□□ -1.51
NCBP3Q53F19 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCBP3Q53F19 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.62□□□□□ -1.51
NCBP3Q53F19 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCBP3Q53F19 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NCBP3Q53F19 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NCBP3Q53F19 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NCBP3Q53F19 SNORA68.1-201ENST00000364537 132 ntBASIC5.61□□□□□ -1.51
NCBP3Q53F19 MIR1179-201ENST00000408703 91 ntBASIC5.61□□□□□ -1.51
NCBP3Q53F19 MIR1289-1-201ENST00000408836 144 ntBASIC5.61□□□□□ -1.51
NCBP3Q53F19 HSPE1P9-201ENST00000440046 311 ntBASIC5.61□□□□□ -1.51
NCBP3Q53F19 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NCBP3Q53F19 AC091167.1-201ENST00000492017 396 ntBASIC5.61□□□□□ -1.51
NCBP3Q53F19 AC110768.1-201ENST00000509222 400 ntBASIC5.61□□□□□ -1.51
NCBP3Q53F19 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NCBP3Q53F19 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NCBP3Q53F19 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.6□□□□□ -1.51
NCBP3Q53F19 SNORD114-10-201ENST00000363409 72 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-447P-201ENST00000410293 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-1118P-201ENST00000410382 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-1076P-201ENST00000410397 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-355P-201ENST00000410427 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-791P-201ENST00000410467 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-705P-201ENST00000410601 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-1100P-201ENST00000410691 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-860P-201ENST00000410860 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-602P-201ENST00000411155 105 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-1217P-201ENST00000411276 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU6-785P-201ENST00000411324 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 AC099522.1-202ENST00000514718 367 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNA5SP49-201ENST00000516450 115 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 RNU7-137P-201ENST00000516788 62 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 U6.90-201ENST00000614007 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 U6.70-201ENST00000620287 104 ntBASIC5.6□□□□□ -1.51
NCBP3Q53F19 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NCBP3Q53F19 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NCBP3Q53F19 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NCBP3Q53F19 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC5.59□□□□□ -1.51
NCBP3Q53F19 MIRLET7A1-201ENST00000362295 80 ntBASIC5.59□□□□□ -1.51
NCBP3Q53F19 IGLV3-26-201ENST00000520756 302 ntBASIC5.59□□□□□ -1.51
NCBP3Q53F19 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NCBP3Q53F19 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
NCBP3Q53F19 RNU6-686P-201ENST00000364839 107 ntBASIC5.58□□□□□ -1.52
NCBP3Q53F19 AL138878.1-201ENST00000405131 347 ntBASIC5.58□□□□□ -1.52
NCBP3Q53F19 SNORD4B-201ENST00000459083 72 ntBASIC5.58□□□□□ -1.52
NCBP3Q53F19 MIR7702-201ENST00000621931 59 ntBASIC5.58□□□□□ -1.52
NCBP3Q53F19 MIR3653-201ENST00000625572 110 ntBASIC5.58□□□□□ -1.52
NCBP3Q53F19 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NCBP3Q53F19 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NCBP3Q53F19 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NCBP3Q53F19 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NCBP3Q53F19 SNORA11-201ENST00000408789 128 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms