Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 Y_RNA.622-201ENST00000411091 108 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.33□□□□□ -1.88
ECM1Q16610 HMGN2P32-201ENST00000444648 269 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 RNU6-1041P-201ENST00000516254 102 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 RNA5SP153-201ENST00000516498 76 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 RPL23AP91-201ENST00000569211 455 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 MIR4325-201ENST00000583049 90 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 AC073413.2-201ENST00000604332 360 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ECM1Q16610 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
ECM1Q16610 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ECM1Q16610 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ECM1Q16610 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.33□□□□□ -1.88
ECM1Q16610 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ECM1Q16610 AC245060.5-201ENST00000610778 3293 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
ECM1Q16610 Y_RNA.111-201ENST00000363248 100 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 SNORD45.3-201ENST00000363836 72 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 RNU6-978P-201ENST00000364371 103 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 MIR488-201ENST00000365739 83 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 MIR29C-201ENST00000385231 88 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 AC245047.4-201ENST00000433189 144 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 AC104389.3-201ENST00000445629 235 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 UQCRHP3-201ENST00000451503 251 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 SNRPGP8-201ENST00000454064 226 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 RNA5SP395-201ENST00000516567 118 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 RNU6-197P-201ENST00000516680 100 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 AL929325.1-201ENST00000603096 117 ntBASIC3.32□□□□□ -1.88
ECM1Q16610 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ECM1Q16610 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ECM1Q16610 Y_RNA.346-201ENST00000365385 112 ntBASIC3.31□□□□□ -1.88
ECM1Q16610 AL603914.1-201ENST00000401964 204 ntBASIC3.31□□□□□ -1.88
ECM1Q16610 RNU2-70P-201ENST00000410718 179 ntBASIC3.31□□□□□ -1.88
ECM1Q16610 CST2P1-201ENST00000425770 87 ntBASIC3.31□□□□□ -1.88
ECM1Q16610 AL049861.1-201ENST00000603130 150 ntBASIC3.31□□□□□ -1.88
ECM1Q16610 MIR338-201ENST00000636369 67 ntBASIC3.31□□□□□ -1.88
ECM1Q16610 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.31□□□□□ -1.88
ECM1Q16610 AC108206.1-201ENST00000570186 4159 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ECM1Q16610 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.3□□□□□ -1.88
ECM1Q16610 RNU6-647P-201ENST00000364243 107 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 RNU6-1107P-201ENST00000364817 104 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 RNU6-1072P-201ENST00000384703 107 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 RNU6-443P-201ENST00000384780 107 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 AL109933.2-201ENST00000452651 260 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.3□□□□□ -1.88
ECM1Q16610 AC233266.1-201ENST00000454518 96 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 RN7SL633P-201ENST00000488974 297 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 RN7SKP12-201ENST00000516275 143 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 RNU6-341P-201ENST00000516973 96 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.3□□□□□ -1.88
ECM1Q16610 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.3□□□□□ -1.88
ECM1Q16610 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.3□□□□□ -1.88
ECM1Q16610 AL021707.8-201ENST00000609428 183 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 AC242852.1-201ENST00000612151 96 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 AC025166.1-201ENST00000612411 163 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 AL162274.2-201ENST00000614406 332 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 AC244015.1-201ENST00000622301 99 ntBASIC3.3□□□□□ -1.88
ECM1Q16610 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ECM1Q16610 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ECM1Q16610 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ECM1Q16610 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ECM1Q16610 MIR340-201ENST00000362125 95 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 RNU6-508P-201ENST00000363231 103 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 RNU6-756P-201ENST00000383997 107 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 SNORA51.10-201ENST00000384418 136 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 SNORA44-201ENST00000384584 132 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 SNORD78.1-201ENST00000390866 65 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 RNA5SP274-201ENST00000410484 108 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 AC109327.2-201ENST00000448339 378 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 OR9P1P-201ENST00000496431 281 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 RNU6-412P-201ENST00000516434 106 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.29□□□□□ -1.88
ECM1Q16610 MIR3126-201ENST00000577443 74 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 AL442128.1-201ENST00000615151 90 ntBASIC3.29□□□□□ -1.88
ECM1Q16610 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
ECM1Q16610 MTND5P18-201ENST00000445624 1801 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 RNU6-820P-201ENST00000384273 107 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 AL139132.1-201ENST00000431587 344 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 RPS29P6-201ENST00000438196 145 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 HMGN1P7-201ENST00000491722 313 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.28□□□□□ -1.88
ECM1Q16610 RN7SKP43-201ENST00000516173 320 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 MIR6079-201ENST00000635807 62 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ECM1Q16610 FAM35CP-201ENST00000554755 2470 ntBASIC3.28□□□□□ -1.88
ECM1Q16610 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ECM1Q16610 Y_RNA.85-201ENST00000363014 111 ntBASIC3.27□□□□□ -1.89
ECM1Q16610 RNU6-1209P-201ENST00000363655 107 ntBASIC3.27□□□□□ -1.89
ECM1Q16610 RNU6-309P-201ENST00000364573 106 ntBASIC3.27□□□□□ -1.89
ECM1Q16610 SNORA8-201ENST00000384574 139 ntBASIC3.27□□□□□ -1.89
ECM1Q16610 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.27□□□□□ -1.89
ECM1Q16610 SNORA40.13-201ENST00000516379 120 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms