Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC026782.1-201ENST00000512952 449 ntBASIC0.28□□□□□ -2.36
SSX1Q16384 RNU6-506P-201ENST00000516553 94 ntBASIC0.28□□□□□ -2.36
SSX1Q16384 RNU6-229P-201ENST00000516614 102 ntBASIC0.28□□□□□ -2.36
SSX1Q16384 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.27□□□□□ -2.37
SSX1Q16384 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SSX1Q16384 MIR1-1-201ENST00000362147 71 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 Y_RNA.473-201ENST00000384333 102 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 SNORA2B-201ENST00000384583 137 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 SNORD12B-201ENST00000410433 91 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 RNU6-177P-201ENST00000411257 104 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 AC009161.1-201ENST00000417306 376 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 MTATP6P17-201ENST00000431030 672 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 MTND3P21-201ENST00000433774 331 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
SSX1Q16384 RPS29P1-201ENST00000465274 159 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.27□□□□□ -2.37
SSX1Q16384 AC105313.1-201ENST00000509121 353 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 AC093027.1-201ENST00000546698 429 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 MIR4790-201ENST00000577799 79 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 MIR4300-201ENST00000581016 96 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 AC104695.3-201ENST00000604052 296 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 AC243829.6-201ENST00000612652 106 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 AC004467.1-201ENST00000615678 330 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 MIR6513-201ENST00000621188 64 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.27□□□□□ -2.37
SSX1Q16384 MIR4251-201ENST00000635819 61 ntBASIC0.27□□□□□ -2.37
SSX1Q16384 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
SSX1Q16384 Y_RNA.41-201ENST00000362646 102 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 SNORD50B-201ENST00000364995 70 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 snoU2-30.1-201ENST00000365012 70 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 Y_RNA.402-201ENST00000383972 102 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
SSX1Q16384 MIR548J-201ENST00000408833 112 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 RNA5SP95-201ENST00000410319 137 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 RNU6-613P-201ENST00000410412 108 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 AC074085.1-201ENST00000413598 418 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 AL139396.1-201ENST00000421137 167 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 MTND5P5-201ENST00000503764 376 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.26□□□□□ -2.37
SSX1Q16384 MIR8070-201ENST00000616510 88 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 AC008133.2-201ENST00000624540 351 ntBASIC0.26□□□□□ -2.37
SSX1Q16384 Y_RNA.2-201ENST00000362330 96 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 RNU6-1301P-201ENST00000362724 104 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 Y_RNA.172-201ENST00000363765 102 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 MIR140-201ENST00000385282 100 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 AL353997.1-201ENST00000432936 108 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 HMGN2P32-201ENST00000444648 269 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 RNU6-329P-201ENST00000459618 107 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 RNU6-408P-201ENST00000515910 100 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 RNU6-496P-201ENST00000516145 99 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 AC026407.1-201ENST00000518369 204 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 MTND2P38-201ENST00000522536 667 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 AC022616.4-201ENST00000522985 181 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 MIR548AR-201ENST00000582191 57 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 AC018638.8-201ENST00000588755 281 ntBASIC0.25□□□□□ -2.37
SSX1Q16384 RNY4P14-201ENST00000363656 96 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 SNORD28B-201ENST00000390993 75 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 AL031003.1-201ENST00000404229 172 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 Y_RNA.594-201ENST00000410373 140 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.24□□□□□ -2.37
SSX1Q16384 AC005534.2-201ENST00000431047 433 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.24□□□□□ -2.37
SSX1Q16384 AC098826.2-201ENST00000452011 651 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 Y_RNA.670-201ENST00000516255 105 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 Y_RNA.682-201ENST00000516457 100 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 RNU6-1223P-201ENST00000517124 104 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.24□□□□□ -2.37
SSX1Q16384 AC055872.1-201ENST00000570978 278 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 AL355073.2-201ENST00000612106 557 ntBASIC0.24□□□□□ -2.37
SSX1Q16384 MIRLET7D-201ENST00000362263 87 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 RNU6-369P-201ENST00000362515 102 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 Y_RNA.148-201ENST00000363557 117 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 Y_RNA.157-201ENST00000363638 102 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 RNU6-961P-201ENST00000363893 105 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 Y_RNA.368-201ENST00000365547 113 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 Y_RNA.559-201ENST00000384686 107 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 MIR181A1-201ENST00000385026 110 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 RNU6-131P-201ENST00000391144 107 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 RNU6-1050P-201ENST00000410388 107 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 RNU2-61P-201ENST00000411069 191 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.23□□□□□ -2.37
SSX1Q16384 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 SNRPGP10-201ENST00000432323 225 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 RNU6-1016P-201ENST00000516689 94 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 AC245505.1-201ENST00000556398 224 ntBASIC0.23□□□□□ -2.37
SSX1Q16384 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.23□□□□□ -2.37
SSX1Q16384 AL589743.1-201ENST00000551932 2712 ntBASIC0.22□□□□□ -2.37
SSX1Q16384 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.22□□□□□ -2.37
SSX1Q16384 Y_RNA.89-201ENST00000363031 102 ntBASIC0.22□□□□□ -2.37
SSX1Q16384 Y_RNA.101-201ENST00000363154 102 ntBASIC0.22□□□□□ -2.37
SSX1Q16384 Y_RNA.168-201ENST00000363740 102 ntBASIC0.22□□□□□ -2.37
SSX1Q16384 RNU6-342P-201ENST00000384521 104 ntBASIC0.22□□□□□ -2.37
SSX1Q16384 MIR573-201ENST00000384964 99 ntBASIC0.22□□□□□ -2.37
SSX1Q16384 RNA5SP118-201ENST00000410385 109 ntBASIC0.22□□□□□ -2.37
SSX1Q16384 MTND2P22-201ENST00000444325 1033 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms