Protein–RNA interactions for Protein: Q14993

COL19A1, Collagen alpha-1(XIX) chain, humanhuman

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1Q14993 AL135938.1-201ENST00000443141 297 ntBASIC3.35□□□□□ -1.87
COL19A1Q14993 AL021397.1-201ENST00000451806 248 ntBASIC3.35□□□□□ -1.87
COL19A1Q14993 AC023449.1-201ENST00000454464 154 ntBASIC3.35□□□□□ -1.87
COL19A1Q14993 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.35□□□□□ -1.87
COL19A1Q14993 SNORA18.4-201ENST00000516440 124 ntBASIC3.35□□□□□ -1.87
COL19A1Q14993 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.35□□□□□ -1.87
COL19A1Q14993 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.35□□□□□ -1.87
COL19A1Q14993 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.35□□□□□ -1.87
COL19A1Q14993 MIR1245B-201ENST00000636115 69 ntBASIC3.35□□□□□ -1.87
COL19A1Q14993 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL19A1Q14993 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
COL19A1Q14993 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL19A1Q14993 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
COL19A1Q14993 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL19A1Q14993 RNU4-82P-201ENST00000362443 140 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 Y_RNA.49-201ENST00000362714 112 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 Y_RNA.99-201ENST00000363138 105 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 Y_RNA.528-201ENST00000384575 108 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 MIR570-201ENST00000384917 97 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL19A1Q14993 MIR891A-201ENST00000401237 79 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 AC011406.1-201ENST00000512440 370 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 SNORA70.19-201ENST00000516717 90 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 AC107934.2-201ENST00000518653 310 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 AC062037.1-201ENST00000605302 128 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 RNU6-94P-201ENST00000607728 107 ntBASIC3.34□□□□□ -1.87
COL19A1Q14993 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL19A1Q14993 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
COL19A1Q14993 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
COL19A1Q14993 AC062016.1-201ENST00000355719 319 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 Y_RNA.220-201ENST00000364244 109 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 MIR624-201ENST00000385217 97 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 RNA5SP511-201ENST00000410487 115 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 RNA5SP127-201ENST00000411051 133 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 AC109327.2-201ENST00000448339 378 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 RNA5SP367-201ENST00000516557 118 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 AL442128.1-201ENST00000615151 90 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 AC017071.1-201ENST00000564407 2204 ntBASIC3.33□□□□□ -1.88
COL19A1Q14993 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
COL19A1Q14993 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL19A1Q14993 Y_RNA.52-201ENST00000362760 96 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 SNORA71.1-201ENST00000364523 117 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 RNU6-1014P-201ENST00000383940 103 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 RNA5SP323-201ENST00000391094 133 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 MIR1263-201ENST00000408324 86 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 RNA5SP184-201ENST00000411071 108 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 EEF1A1P41-201ENST00000414667 207 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 AL135786.1-201ENST00000415892 214 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 RPS15AP28-201ENST00000435088 386 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 AF228730.3-201ENST00000436691 102 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.32□□□□□ -1.88
COL19A1Q14993 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.32□□□□□ -1.88
COL19A1Q14993 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.32□□□□□ -1.88
COL19A1Q14993 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.32□□□□□ -1.88
COL19A1Q14993 RN7SKP132-201ENST00000516001 208 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 RN7SKP12-201ENST00000516275 143 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 MIR2681-201ENST00000581814 105 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.32□□□□□ -1.88
COL19A1Q14993 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL19A1Q14993 AL136360.1-201ENST00000503377 1900 ntBASIC3.32□□□□□ -1.88
COL19A1Q14993 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.32□□□□□ -1.88
COL19A1Q14993 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL19A1Q14993 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL19A1Q14993 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL19A1Q14993 RNU6-508P-201ENST00000363231 103 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 Y_RNA.634-201ENST00000364811 113 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 Y_RNA.323-201ENST00000365157 109 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 MIR450A2-201ENST00000385022 100 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 MIR1261-201ENST00000408659 82 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 Y_RNA.621-201ENST00000411065 96 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 AC105272.1-201ENST00000438604 198 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 AC108938.1-201ENST00000451204 136 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 AL109933.2-201ENST00000452651 260 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 SNORD77.4-201ENST00000516158 81 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 RN7SKP43-201ENST00000516173 320 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 RNU6-113P-201ENST00000516653 101 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 MIR4319-201ENST00000577285 85 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 AL049861.1-201ENST00000603130 150 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 MIR2052-201ENST00000636055 55 ntBASIC3.31□□□□□ -1.88
COL19A1Q14993 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
COL19A1Q14993 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL19A1Q14993 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL19A1Q14993 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL19A1Q14993 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
COL19A1Q14993 snoU2-30.2-201ENST00000362805 70 ntBASIC3.3□□□□□ -1.88
COL19A1Q14993 RNU6-440P-201ENST00000390882 105 ntBASIC3.3□□□□□ -1.88
COL19A1Q14993 MIR1262-201ENST00000408276 93 ntBASIC3.3□□□□□ -1.88
COL19A1Q14993 RPL23AP67-201ENST00000465341 474 ntBASIC3.3□□□□□ -1.88
COL19A1Q14993 COX6CP6-201ENST00000490840 228 ntBASIC3.3□□□□□ -1.88
COL19A1Q14993 AC097462.1-201ENST00000514125 324 ntBASIC3.3□□□□□ -1.88
COL19A1Q14993 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.3□□□□□ -1.88
COL19A1Q14993 U2.20-201ENST00000613956 192 ntBASIC3.3□□□□□ -1.88
COL19A1Q14993 uc_338.4-201ENST00000616635 176 ntBASIC3.3□□□□□ -1.88
COL19A1Q14993 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL19A1Q14993 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms