Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SNORD12-201ENST00000391002 90 ntBASIC1.08□□□□□ -2.24
SCN1BQ07699 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
SCN1BQ07699 RPS20P10-201ENST00000451209 253 ntBASIC1.08□□□□□ -2.24
SCN1BQ07699 Y_RNA.661-201ENST00000516003 99 ntBASIC1.08□□□□□ -2.24
SCN1BQ07699 AC022616.4-201ENST00000522985 181 ntBASIC1.08□□□□□ -2.24
SCN1BQ07699 MIR4762-201ENST00000585261 75 ntBASIC1.08□□□□□ -2.24
SCN1BQ07699 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SCN1BQ07699 RNU6-1115P-201ENST00000362490 106 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 RNA5SP99-201ENST00000364020 114 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 Y_RNA.570-201ENST00000384750 101 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 MIR516B2-201ENST00000385190 85 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.07□□□□□ -2.24
SCN1BQ07699 MIR1298-201ENST00000408783 112 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 RNU6-855P-201ENST00000410395 104 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 MCFD2P1-201ENST00000417812 300 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 AC002429.1-201ENST00000437672 148 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 SNORD19B-201ENST00000459623 84 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 RNA5SP458-201ENST00000516188 119 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.07□□□□□ -2.24
SCN1BQ07699 AC015712.3-201ENST00000559380 164 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 AC005972.2-201ENST00000604690 348 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 AC104985.2-201ENST00000620598 500 ntBASIC1.07□□□□□ -2.24
SCN1BQ07699 Y_RNA.187-201ENST00000363918 113 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 Y_RNA.496-201ENST00000384444 101 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 SNORA80D-201ENST00000384488 135 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 RNU6-482P-201ENST00000391068 107 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 SNORA17.3-201ENST00000391159 129 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 RNU4-62P-201ENST00000410125 130 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.06□□□□□ -2.24
SCN1BQ07699 AC009474.2-201ENST00000451383 136 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 AC005042.3-201ENST00000453230 174 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 RNU7-152P-201ENST00000458982 64 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
SCN1BQ07699 MIR4769-201ENST00000584126 77 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 AC092447.9-201ENST00000603395 144 ntBASIC1.06□□□□□ -2.24
SCN1BQ07699 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SCN1BQ07699 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SCN1BQ07699 Y_RNA.356-201ENST00000365475 113 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 SNORA72-201ENST00000384339 132 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 Y_RNA.529-201ENST00000384586 119 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 MIR522-201ENST00000385071 87 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 AC245047.8-201ENST00000456455 284 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 RNU6-875P-201ENST00000516488 106 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 AC093027.1-201ENST00000546698 429 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 MIR4421-201ENST00000578133 69 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 MIR3192-201ENST00000584920 77 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SCN1BQ07699 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.05□□□□□ -2.24
SCN1BQ07699 AC008163.1-202ENST00000636004 2889 ntBASIC1.05□□□□□ -2.24
SCN1BQ07699 Y_RNA.39-201ENST00000362620 98 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 SNORA7.1-201ENST00000363750 139 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 SNORA75.2-201ENST00000391138 150 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 SNORA75.3-201ENST00000391231 150 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
SCN1BQ07699 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.04□□□□□ -2.24
SCN1BQ07699 snoU13.25-201ENST00000458945 104 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 AC004223.1-201ENST00000479840 271 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 RPS26P48-201ENST00000491713 339 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 FGF7P4-201ENST00000509595 295 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 MIR4423-201ENST00000580922 80 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 AL391903.3-201ENST00000612158 163 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SCN1BQ07699 AL157834.3-201ENST00000615543 103 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
SCN1BQ07699 AL391516.1-201ENST00000554380 2449 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 RNU6-1084P-201ENST00000362498 107 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 Y_RNA.331-201ENST00000365267 102 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 RNU6-969P-201ENST00000383900 105 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 RNU6-1009P-201ENST00000390996 107 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 SNORA40.6-201ENST00000391153 128 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 RNU6-710P-201ENST00000410424 105 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.03□□□□□ -2.24
SCN1BQ07699 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.03□□□□□ -2.24
SCN1BQ07699 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 RNU6-507P-201ENST00000516045 100 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 SNORD45.4-201ENST00000516629 73 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 MIR5188-201ENST00000583467 113 ntBASIC1.03□□□□□ -2.24
SCN1BQ07699 AL590004.1-201ENST00000405321 300 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 AL390729.2-201ENST00000416137 156 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 AC108667.1-201ENST00000428618 249 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.02□□□□□ -2.25
SCN1BQ07699 RPS29P29-201ENST00000456396 171 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 HMGN1P7-201ENST00000491722 313 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 AC108729.3-201ENST00000513484 108 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 RNU4-77P-201ENST00000516692 156 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 DEFB117-201ENST00000602356 141 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 RBM11P1-201ENST00000604951 799 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 Y_RNA.772-201ENST00000606692 102 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 AC010205.1-201ENST00000616668 449 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 AC091925.1-201ENST00000623204 462 ntBASIC1.02□□□□□ -2.25
SCN1BQ07699 Y_RNA.58-201ENST00000362807 102 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms