Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 Y_RNA.703-201ENST00000516846 111 ntBASIC2.03□□□□□ -2.08
LTBQ06643 SNORA48.11-201ENST00000517015 89 ntBASIC2.03□□□□□ -2.08
LTBQ06643 AL355297.2-201ENST00000604792 129 ntBASIC2.03□□□□□ -2.08
LTBQ06643 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.03□□□□□ -2.08
LTBQ06643 AC004832.4-201ENST00000608952 331 ntBASIC2.03□□□□□ -2.08
LTBQ06643 AC068647.2-201ENST00000637380 353 ntBASIC2.03□□□□□ -2.08
LTBQ06643 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LTBQ06643 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LTBQ06643 AL157777.2-201ENST00000258070 137 ntBASIC2.02□□□□□ -2.09
LTBQ06643 Y_RNA.121-201ENST00000363309 113 ntBASIC2.02□□□□□ -2.09
LTBQ06643 SNORA38-201ENST00000363946 132 ntBASIC2.02□□□□□ -2.09
LTBQ06643 RNA5SP125-201ENST00000364843 120 ntBASIC2.02□□□□□ -2.09
LTBQ06643 Y_RNA.332-201ENST00000365271 113 ntBASIC2.02□□□□□ -2.09
LTBQ06643 RNU6-407P-201ENST00000365280 104 ntBASIC2.02□□□□□ -2.09
LTBQ06643 SNORA64-201ENST00000384674 134 ntBASIC2.02□□□□□ -2.09
LTBQ06643 MIR221-201ENST00000385135 110 ntBASIC2.02□□□□□ -2.09
LTBQ06643 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.02□□□□□ -2.09
LTBQ06643 HSPE1P13-201ENST00000451143 297 ntBASIC2.02□□□□□ -2.09
LTBQ06643 AC104435.1-201ENST00000483483 166 ntBASIC2.02□□□□□ -2.09
LTBQ06643 RNU7-200P-201ENST00000516105 62 ntBASIC2.02□□□□□ -2.09
LTBQ06643 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LTBQ06643 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
LTBQ06643 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LTBQ06643 AL159152.1-201ENST00000635019 2587 ntBASIC2.02□□□□□ -2.09
LTBQ06643 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.01□□□□□ -2.09
LTBQ06643 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
LTBQ06643 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LTBQ06643 RNU6-1205P-201ENST00000363625 106 ntBASIC2.01□□□□□ -2.09
LTBQ06643 RNA5SP240-201ENST00000365355 128 ntBASIC2.01□□□□□ -2.09
LTBQ06643 RNU6-1130P-201ENST00000365434 107 ntBASIC2.01□□□□□ -2.09
LTBQ06643 RNU6-969P-201ENST00000383900 105 ntBASIC2.01□□□□□ -2.09
LTBQ06643 SNORA8.3-201ENST00000384679 139 ntBASIC2.01□□□□□ -2.09
LTBQ06643 MIR489-201ENST00000384923 84 ntBASIC2.01□□□□□ -2.09
LTBQ06643 RNU6-383P-201ENST00000410864 94 ntBASIC2.01□□□□□ -2.09
LTBQ06643 AC123900.1-201ENST00000420390 96 ntBASIC2.01□□□□□ -2.09
LTBQ06643 AL137159.1-201ENST00000452808 512 ntBASIC2.01□□□□□ -2.09
LTBQ06643 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.01□□□□□ -2.09
LTBQ06643 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.01□□□□□ -2.09
LTBQ06643 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.01□□□□□ -2.09
LTBQ06643 RNU7-115P-201ENST00000516433 55 ntBASIC2.01□□□□□ -2.09
LTBQ06643 RNU6-295P-201ENST00000516901 104 ntBASIC2.01□□□□□ -2.09
LTBQ06643 Y_RNA.802-201ENST00000614892 130 ntBASIC2.01□□□□□ -2.09
LTBQ06643 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.01□□□□□ -2.09
LTBQ06643 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LTBQ06643 Y_RNA.75-201ENST00000362927 97 ntBASIC2□□□□□ -2.09
LTBQ06643 RNU6-271P-201ENST00000363858 105 ntBASIC2□□□□□ -2.09
LTBQ06643 RNU6-1240P-201ENST00000365155 104 ntBASIC2□□□□□ -2.09
LTBQ06643 MIR144-201ENST00000384886 86 ntBASIC2□□□□□ -2.09
LTBQ06643 MT-TT-201ENST00000387460 66 ntBASIC2□□□□□ -2.09
LTBQ06643 RNA5SP511-201ENST00000410487 115 ntBASIC2□□□□□ -2.09
LTBQ06643 RNU2-63P-201ENST00000410792 194 ntBASIC2□□□□□ -2.09
LTBQ06643 SEPT7P4-201ENST00000437076 306 ntBASIC2□□□□□ -2.09
LTBQ06643 AC010409.1-201ENST00000487382 476 ntBASIC2□□□□□ -2.09
LTBQ06643 Y_RNA.797-201ENST00000515977 94 ntBASIC2□□□□□ -2.09
LTBQ06643 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2□□□□□ -2.09
LTBQ06643 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2□□□□□ -2.09
LTBQ06643 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2□□□□□ -2.09
LTBQ06643 MIR3910-1-201ENST00000580936 111 ntBASIC2□□□□□ -2.09
LTBQ06643 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2□□□□□ -2.09
LTBQ06643 AC108706.1-201ENST00000611053 297 ntBASIC2□□□□□ -2.09
LTBQ06643 AC009831.4-201ENST00000620744 325 ntBASIC2□□□□□ -2.09
LTBQ06643 U2.22-201ENST00000636441 106 ntBASIC2□□□□□ -2.09
LTBQ06643 AC009487.4-201ENST00000624969 3585 ntBASIC1.99□□□□□ -2.09
LTBQ06643 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LTBQ06643 Y_RNA.23-201ENST00000362496 106 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RNU1-17P-201ENST00000363022 152 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RNU6-312P-201ENST00000364629 107 ntBASIC1.99□□□□□ -2.09
LTBQ06643 Y_RNA.272-201ENST00000364696 102 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RNU6-818P-201ENST00000364837 108 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RNU6-117P-201ENST00000365415 107 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RNU6-136P-201ENST00000384663 107 ntBASIC1.99□□□□□ -2.09
LTBQ06643 MIR499A-201ENST00000384903 122 ntBASIC1.99□□□□□ -2.09
LTBQ06643 MIR561-201ENST00000385216 97 ntBASIC1.99□□□□□ -2.09
LTBQ06643 MIR526A2-201ENST00000390198 65 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RNU6-578P-201ENST00000390980 103 ntBASIC1.99□□□□□ -2.09
LTBQ06643 SNORA36B-201ENST00000410438 131 ntBASIC1.99□□□□□ -2.09
LTBQ06643 AC060773.1-201ENST00000421698 310 ntBASIC1.99□□□□□ -2.09
LTBQ06643 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.99□□□□□ -2.09
LTBQ06643 AL357134.1-201ENST00000445848 426 ntBASIC1.99□□□□□ -2.09
LTBQ06643 AC245047.8-201ENST00000456455 284 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RN7SKP164-201ENST00000516138 266 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RNU2-34P-201ENST00000516534 121 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RNU6-789P-201ENST00000517105 102 ntBASIC1.99□□□□□ -2.09
LTBQ06643 RNU6-667P-201ENST00000517186 102 ntBASIC1.99□□□□□ -2.09
LTBQ06643 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.99□□□□□ -2.09
LTBQ06643 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.99□□□□□ -2.09
LTBQ06643 AC015720.1-201ENST00000565251 277 ntBASIC1.99□□□□□ -2.09
LTBQ06643 MIR4744-201ENST00000581563 82 ntBASIC1.99□□□□□ -2.09
LTBQ06643 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
LTBQ06643 AC245884.12-201ENST00000615364 59 ntBASIC1.99□□□□□ -2.09
LTBQ06643 MIR548AY-201ENST00000617669 107 ntBASIC1.99□□□□□ -2.09
LTBQ06643 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LTBQ06643 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LTBQ06643 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LTBQ06643 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LTBQ06643 RNU6-275P-201ENST00000364910 107 ntBASIC1.98□□□□□ -2.09
LTBQ06643 RNY1P5-201ENST00000383890 115 ntBASIC1.98□□□□□ -2.09
LTBQ06643 AC008134.1-201ENST00000420943 193 ntBASIC1.98□□□□□ -2.09
LTBQ06643 AC011753.1-201ENST00000451001 220 ntBASIC1.98□□□□□ -2.09
LTBQ06643 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 245.7 ms