Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 RNU6-490P-201ENST00000362985 107 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 Y_RNA.148-201ENST00000363557 117 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 Y_RNA.197-201ENST00000364004 102 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 Y_RNA.267-201ENST00000364679 109 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 Y_RNA.314-201ENST00000365114 102 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 RNU6-407P-201ENST00000365280 104 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 MT-TD-201ENST00000387419 68 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 RNU6-130P-201ENST00000411112 103 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 AL354751.2-201ENST00000415471 210 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 MTND1P14-201ENST00000427400 950 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 MRPS10P1-201ENST00000448483 130 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 Y_RNA.639-201ENST00000458981 102 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 MIR5188-201ENST00000583467 113 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 AC005899.2-201ENST00000584353 90 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 AC092447.9-201ENST00000603395 144 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 PART1_1.1-201ENST00000611761 217 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 AC022140.2-201ENST00000623500 188 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 U6.92-201ENST00000636464 89 ntBASIC1.1□□□□□ -2.23
CSTF1Q05048 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
CSTF1Q05048 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
CSTF1Q05048 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.23
CSTF1Q05048 Y_RNA.101-201ENST00000363154 102 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 Y_RNA.124-201ENST00000363339 93 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 Y_RNA.146-201ENST00000363549 102 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 Y_RNA.265-201ENST00000364677 108 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 Y_RNA.395-201ENST00000383945 109 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 SNORA12.1-201ENST00000390873 148 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 SNORA69.1-201ENST00000390904 137 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 AL355796.1-201ENST00000406706 323 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 SNORD12B-201ENST00000410433 91 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.09□□□□□ -2.23
CSTF1Q05048 RNU6-947P-201ENST00000516264 106 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 RNU6-1137P-201ENST00000517073 99 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 AC020661.2-201ENST00000560114 134 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 AC006600.1-201ENST00000572529 153 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 MIR3664-201ENST00000579074 99 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 AL160413.1-201ENST00000622780 310 ntBASIC1.09□□□□□ -2.23
CSTF1Q05048 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CSTF1Q05048 MIR373-201ENST00000362273 69 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 RNU6-797P-201ENST00000363101 109 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 Y_RNA.252-201ENST00000364556 101 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 RNU6-450P-201ENST00000364654 107 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 AC022028.1-201ENST00000412054 408 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.08□□□□□ -2.24
CSTF1Q05048 AC114482.1-201ENST00000418010 247 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 MTCO2P27-201ENST00000420740 428 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 MTND4P28-201ENST00000426217 387 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 RAB28P5-201ENST00000427490 651 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.08□□□□□ -2.24
CSTF1Q05048 MTND4P19-201ENST00000446659 478 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 RNU7-94P-201ENST00000459576 63 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 SNORA40.9-201ENST00000515895 93 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 RNU6-1012P-201ENST00000516606 109 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 RN7SKP49-201ENST00000516675 260 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 RNU7-172P-201ENST00000517125 64 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 AC018448.1-201ENST00000552843 316 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 RPL21P9-201ENST00000556149 474 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 AL020996.3-201ENST00000606617 222 ntBASIC1.08□□□□□ -2.24
CSTF1Q05048 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.08□□□□□ -2.24
CSTF1Q05048 Y_RNA.105-201ENST00000363182 111 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 Y_RNA.172-201ENST00000363765 102 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 RNU4-41P-201ENST00000364426 143 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 RNU4-76P-201ENST00000364509 141 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 RNU1-133P-201ENST00000364867 167 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 SNORA22B-201ENST00000383876 138 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 RNU6-1199P-201ENST00000411249 104 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 MCFD2P1-201ENST00000417812 300 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 AC236972.2-201ENST00000434979 310 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 MTCYBP6-201ENST00000441810 138 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.07□□□□□ -2.24
CSTF1Q05048 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.07□□□□□ -2.24
CSTF1Q05048 AC010598.1-201ENST00000510378 103 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 RNU6-408P-201ENST00000515910 100 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 RNU2-56P-201ENST00000516826 190 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 RNU6-264P-201ENST00000517134 104 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 CYP3A137P-201ENST00000562436 69 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 AL390123.1-201ENST00000603216 237 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 AC006157.1-201ENST00000611750 366 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 AC073349.3-201ENST00000617616 186 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 U2.1-201ENST00000618978 145 ntBASIC1.07□□□□□ -2.24
CSTF1Q05048 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.07□□□□□ -2.24
CSTF1Q05048 Y_RNA.26-201ENST00000362539 101 ntBASIC1.06□□□□□ -2.24
CSTF1Q05048 SNORA20B-201ENST00000384220 132 ntBASIC1.06□□□□□ -2.24
CSTF1Q05048 RNU6-376P-201ENST00000384731 106 ntBASIC1.06□□□□□ -2.24
CSTF1Q05048 PCNPP5-201ENST00000452246 481 ntBASIC1.06□□□□□ -2.24
CSTF1Q05048 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
CSTF1Q05048 RN7SKP295-201ENST00000517264 153 ntBASIC1.06□□□□□ -2.24
CSTF1Q05048 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.06□□□□□ -2.24
CSTF1Q05048 AC104695.3-201ENST00000604052 296 ntBASIC1.06□□□□□ -2.24
CSTF1Q05048 MIR6079-201ENST00000635807 62 ntBASIC1.06□□□□□ -2.24
CSTF1Q05048 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
CSTF1Q05048 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.06□□□□□ -2.24
CSTF1Q05048 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CSTF1Q05048 Y_RNA.428-201ENST00000384078 102 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 Y_RNA.458-201ENST00000384240 102 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 RNU6-505P-201ENST00000384427 107 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 214.1 ms