Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 Y_RNA.84-201ENST00000363011 104 ntBASIC1.3□□□□□ -2.2
SRPXP78539 Y_RNA.368-201ENST00000365547 113 ntBASIC1.3□□□□□ -2.2
SRPXP78539 SNORA70B-201ENST00000384210 135 ntBASIC1.3□□□□□ -2.2
SRPXP78539 RNU6-1109P-201ENST00000391187 107 ntBASIC1.3□□□□□ -2.2
SRPXP78539 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.3□□□□□ -2.2
SRPXP78539 RNU6-710P-201ENST00000410424 105 ntBASIC1.3□□□□□ -2.2
SRPXP78539 MTCO1P5-201ENST00000433573 344 ntBASIC1.3□□□□□ -2.2
SRPXP78539 AL731563.1-201ENST00000442202 214 ntBASIC1.3□□□□□ -2.2
SRPXP78539 RNU1-98P-201ENST00000458992 160 ntBASIC1.3□□□□□ -2.2
SRPXP78539 OR9P1P-201ENST00000496431 281 ntBASIC1.3□□□□□ -2.2
SRPXP78539 AC008834.1-201ENST00000511612 175 ntBASIC1.3□□□□□ -2.2
SRPXP78539 AP002004.2-201ENST00000531656 154 ntBASIC1.3□□□□□ -2.2
SRPXP78539 AC011604.1-201ENST00000545978 196 ntBASIC1.3□□□□□ -2.2
SRPXP78539 AC005972.2-201ENST00000604690 348 ntBASIC1.3□□□□□ -2.2
SRPXP78539 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.3□□□□□ -2.2
SRPXP78539 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.3□□□□□ -2.2
SRPXP78539 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.3□□□□□ -2.2
SRPXP78539 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SRPXP78539 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.29□□□□□ -2.2
SRPXP78539 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SRPXP78539 ICE2P2-201ENST00000483823 2787 ntBASIC1.29□□□□□ -2.2
SRPXP78539 MIR126-201ENST00000362291 85 ntBASIC1.29□□□□□ -2.2
SRPXP78539 U8.2-201ENST00000363156 134 ntBASIC1.29□□□□□ -2.2
SRPXP78539 RNU6-801P-201ENST00000364087 105 ntBASIC1.29□□□□□ -2.2
SRPXP78539 RNU4-41P-201ENST00000364426 143 ntBASIC1.29□□□□□ -2.2
SRPXP78539 RNA5SP126-201ENST00000365092 109 ntBASIC1.29□□□□□ -2.2
SRPXP78539 RNU6-338P-201ENST00000383888 105 ntBASIC1.29□□□□□ -2.2
SRPXP78539 RNU6-950P-201ENST00000384651 107 ntBASIC1.29□□□□□ -2.2
SRPXP78539 MIR583-201ENST00000384846 75 ntBASIC1.29□□□□□ -2.2
SRPXP78539 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
SRPXP78539 SNORA26.5-201ENST00000391215 123 ntBASIC1.29□□□□□ -2.2
SRPXP78539 AL034345.1-201ENST00000407768 123 ntBASIC1.29□□□□□ -2.2
SRPXP78539 MIR548F4-201ENST00000408515 105 ntBASIC1.29□□□□□ -2.2
SRPXP78539 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
SRPXP78539 AC004965.1-201ENST00000413033 213 ntBASIC1.29□□□□□ -2.2
SRPXP78539 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.29□□□□□ -2.2
SRPXP78539 HSPE1P24-201ENST00000450782 238 ntBASIC1.29□□□□□ -2.2
SRPXP78539 snoU13.9-201ENST00000458927 103 ntBASIC1.29□□□□□ -2.2
SRPXP78539 AL049830.1-201ENST00000468034 425 ntBASIC1.29□□□□□ -2.2
SRPXP78539 AC117454.1-201ENST00000491120 168 ntBASIC1.29□□□□□ -2.2
SRPXP78539 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.29□□□□□ -2.2
SRPXP78539 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
SRPXP78539 SUMO2P16-201ENST00000519475 264 ntBASIC1.29□□□□□ -2.2
SRPXP78539 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.29□□□□□ -2.2
SRPXP78539 MIR4255-201ENST00000579351 72 ntBASIC1.29□□□□□ -2.2
SRPXP78539 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.29□□□□□ -2.2
SRPXP78539 AC134026.1-201ENST00000623249 2239 ntBASIC1.29□□□□□ -2.2
SRPXP78539 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SRPXP78539 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SRPXP78539 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SRPXP78539 MIR302D-201ENST00000362275 68 ntBASIC1.28□□□□□ -2.2
SRPXP78539 Y_RNA.136-201ENST00000363444 102 ntBASIC1.28□□□□□ -2.2
SRPXP78539 Y_RNA.145-201ENST00000363527 102 ntBASIC1.28□□□□□ -2.2
SRPXP78539 RNU1-42P-201ENST00000364033 160 ntBASIC1.28□□□□□ -2.2
SRPXP78539 U8.7-201ENST00000364940 136 ntBASIC1.28□□□□□ -2.2
SRPXP78539 Y_RNA.456-201ENST00000384232 111 ntBASIC1.28□□□□□ -2.2
SRPXP78539 Y_RNA.459-201ENST00000384251 102 ntBASIC1.28□□□□□ -2.2
SRPXP78539 U8.16-201ENST00000391279 133 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.28□□□□□ -2.2
SRPXP78539 MTND2P23-201ENST00000422990 651 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AC024067.1-201ENST00000426199 223 ntBASIC1.28□□□□□ -2.2
SRPXP78539 FTH1P12-201ENST00000432137 551 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AC104332.1-201ENST00000440471 797 ntBASIC1.28□□□□□ -2.2
SRPXP78539 Z98949.2-201ENST00000440996 144 ntBASIC1.28□□□□□ -2.2
SRPXP78539 PGBD4P5-201ENST00000445958 426 ntBASIC1.28□□□□□ -2.2
SRPXP78539 RNA5SP168-201ENST00000516642 112 ntBASIC1.28□□□□□ -2.2
SRPXP78539 SNORA44.1-201ENST00000517031 108 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AC019176.1-201ENST00000518519 225 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AC024405.2-202ENST00000532731 184 ntBASIC1.28□□□□□ -2.2
SRPXP78539 MIR4778-201ENST00000577635 80 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AC015688.6-201ENST00000577737 104 ntBASIC1.28□□□□□ -2.2
SRPXP78539 MIR3198-2-201ENST00000577868 80 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.28□□□□□ -2.2
SRPXP78539 MIR4719-201ENST00000585233 84 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AC136443.5-201ENST00000603741 370 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AL353621.2-201ENST00000605340 133 ntBASIC1.28□□□□□ -2.2
SRPXP78539 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
SRPXP78539 AL591926.4-201ENST00000616895 298 ntBASIC1.28□□□□□ -2.2
SRPXP78539 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SRPXP78539 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SRPXP78539 MIR513A1-201ENST00000385138 129 ntBASIC1.27□□□□□ -2.21
SRPXP78539 RNU11-5P-201ENST00000391216 129 ntBASIC1.27□□□□□ -2.21
SRPXP78539 RNU6-1203P-201ENST00000410703 110 ntBASIC1.27□□□□□ -2.21
SRPXP78539 RNU6-1143P-201ENST00000516125 104 ntBASIC1.27□□□□□ -2.21
SRPXP78539 RNU1-41P-201ENST00000516161 162 ntBASIC1.27□□□□□ -2.21
SRPXP78539 RNU6-327P-201ENST00000516270 127 ntBASIC1.27□□□□□ -2.21
SRPXP78539 RNU1-48P-201ENST00000516400 162 ntBASIC1.27□□□□□ -2.21
SRPXP78539 RNU2-31P-201ENST00000516954 155 ntBASIC1.27□□□□□ -2.21
SRPXP78539 SCARNA24.2-201ENST00000516968 130 ntBASIC1.27□□□□□ -2.21
SRPXP78539 AC008269.2-201ENST00000561915 1105 ntBASIC1.27□□□□□ -2.21
SRPXP78539 POLR3GP1-201ENST00000594073 261 ntBASIC1.27□□□□□ -2.21
SRPXP78539 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.27□□□□□ -2.21
SRPXP78539 AC073349.3-201ENST00000617616 186 ntBASIC1.27□□□□□ -2.21
SRPXP78539 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SRPXP78539 AC068700.1-201ENST00000565862 3754 ntBASIC1.26□□□□□ -2.21
SRPXP78539 MIRLET7C-201ENST00000362160 84 ntBASIC1.26□□□□□ -2.21
SRPXP78539 SNORD68-201ENST00000363214 84 ntBASIC1.26□□□□□ -2.21
SRPXP78539 RNU6-1309P-201ENST00000363305 108 ntBASIC1.26□□□□□ -2.21
SRPXP78539 SNORD1A-201ENST00000364968 72 ntBASIC1.26□□□□□ -2.21
SRPXP78539 RNA5SP259-201ENST00000365541 109 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms