Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RAE1P78406 AC011604.1-201ENST00000545978 196 ntBASIC2.01□□□□□ -2.09
RAE1P78406 MIR6895-201ENST00000613497 78 ntBASIC2.01□□□□□ -2.09
RAE1P78406 U1.36-201ENST00000620684 176 ntBASIC2.01□□□□□ -2.09
RAE1P78406 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RAE1P78406 MIR367-201ENST00000362299 68 ntBASIC2□□□□□ -2.09
RAE1P78406 RNA5SP160-201ENST00000364866 120 ntBASIC2□□□□□ -2.09
RAE1P78406 AL021397.1-201ENST00000451806 248 ntBASIC2□□□□□ -2.09
RAE1P78406 AC055731.1-201ENST00000474387 401 ntBASIC2□□□□□ -2.09
RAE1P78406 AC084364.2-201ENST00000546924 395 ntBASIC2□□□□□ -2.09
RAE1P78406 MIR4724-201ENST00000579485 89 ntBASIC2□□□□□ -2.09
RAE1P78406 AC022217.4-201ENST00000604389 163 ntBASIC2□□□□□ -2.09
RAE1P78406 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
RAE1P78406 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RAE1P78406 RNU6-1020P-201ENST00000363684 107 ntBASIC1.99□□□□□ -2.09
RAE1P78406 SNORA63D-201ENST00000364359 132 ntBASIC1.99□□□□□ -2.09
RAE1P78406 Y_RNA.308-201ENST00000365043 101 ntBASIC1.99□□□□□ -2.09
RAE1P78406 SNORA6-201ENST00000384033 151 ntBASIC1.99□□□□□ -2.09
RAE1P78406 Y_RNA.435-201ENST00000384095 112 ntBASIC1.99□□□□□ -2.09
RAE1P78406 MIR626-201ENST00000385032 94 ntBASIC1.99□□□□□ -2.09
RAE1P78406 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RAE1P78406 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
RAE1P78406 Y_RNA.793-201ENST00000411222 111 ntBASIC1.99□□□□□ -2.09
RAE1P78406 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.99□□□□□ -2.09
RAE1P78406 RPS27P1-201ENST00000450552 247 ntBASIC1.99□□□□□ -2.09
RAE1P78406 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
RAE1P78406 SNORA59A-201ENST00000459326 152 ntBASIC1.99□□□□□ -2.09
RAE1P78406 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.99□□□□□ -2.09
RAE1P78406 RNU6-1291P-201ENST00000516591 104 ntBASIC1.99□□□□□ -2.09
RAE1P78406 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.99□□□□□ -2.09
RAE1P78406 AP002004.2-201ENST00000531656 154 ntBASIC1.99□□□□□ -2.09
RAE1P78406 SUB1P4-201ENST00000566062 339 ntBASIC1.99□□□□□ -2.09
RAE1P78406 MIR6852-201ENST00000621699 66 ntBASIC1.99□□□□□ -2.09
RAE1P78406 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.99□□□□□ -2.09
RAE1P78406 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
RAE1P78406 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.98□□□□□ -2.09
RAE1P78406 MIR449A-201ENST00000362113 91 ntBASIC1.98□□□□□ -2.09
RAE1P78406 Y_RNA.203-201ENST00000364106 102 ntBASIC1.98□□□□□ -2.09
RAE1P78406 RNU6-923P-201ENST00000364753 107 ntBASIC1.98□□□□□ -2.09
RAE1P78406 Y_RNA.500-201ENST00000384466 111 ntBASIC1.98□□□□□ -2.09
RAE1P78406 MIR144-201ENST00000384886 86 ntBASIC1.98□□□□□ -2.09
RAE1P78406 RNU6-381P-201ENST00000391259 108 ntBASIC1.98□□□□□ -2.09
RAE1P78406 RNU6-493P-201ENST00000391321 108 ntBASIC1.98□□□□□ -2.09
RAE1P78406 RNA5SP338-201ENST00000410495 85 ntBASIC1.98□□□□□ -2.09
RAE1P78406 MTND5P15-201ENST00000434246 349 ntBASIC1.98□□□□□ -2.09
RAE1P78406 Z98949.2-201ENST00000440996 144 ntBASIC1.98□□□□□ -2.09
RAE1P78406 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.98□□□□□ -2.09
RAE1P78406 RNY3P16-201ENST00000516338 101 ntBASIC1.98□□□□□ -2.09
RAE1P78406 RNU6-182P-201ENST00000516970 105 ntBASIC1.98□□□□□ -2.09
RAE1P78406 MIR4308-201ENST00000580634 81 ntBASIC1.98□□□□□ -2.09
RAE1P78406 AL929325.1-201ENST00000603096 117 ntBASIC1.98□□□□□ -2.09
RAE1P78406 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
RAE1P78406 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.98□□□□□ -2.09
RAE1P78406 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RAE1P78406 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RAE1P78406 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RAE1P78406 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.97□□□□□ -2.09
RAE1P78406 RNU4-10P-201ENST00000364383 140 ntBASIC1.97□□□□□ -2.09
RAE1P78406 Y_RNA.267-201ENST00000364679 109 ntBASIC1.97□□□□□ -2.09
RAE1P78406 RNU6-918P-201ENST00000391219 106 ntBASIC1.97□□□□□ -2.09
RAE1P78406 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.97□□□□□ -2.09
RAE1P78406 AC245047.3-201ENST00000429428 127 ntBASIC1.97□□□□□ -2.09
RAE1P78406 AL606517.2-201ENST00000442855 241 ntBASIC1.97□□□□□ -2.09
RAE1P78406 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
RAE1P78406 AC090255.1-201ENST00000495779 349 ntBASIC1.97□□□□□ -2.09
RAE1P78406 RN7SKP164-201ENST00000516138 266 ntBASIC1.97□□□□□ -2.09
RAE1P78406 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
RAE1P78406 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RAE1P78406 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
RAE1P78406 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RAE1P78406 SNORA1B-201ENST00000362535 133 ntBASIC1.96□□□□□ -2.1
RAE1P78406 RNU6-47P-201ENST00000383866 107 ntBASIC1.96□□□□□ -2.1
RAE1P78406 RNU6-969P-201ENST00000383900 105 ntBASIC1.96□□□□□ -2.1
RAE1P78406 SNORA67.3-201ENST00000384366 140 ntBASIC1.96□□□□□ -2.1
RAE1P78406 SNORA64-201ENST00000384674 134 ntBASIC1.96□□□□□ -2.1
RAE1P78406 MIR520A-201ENST00000384862 85 ntBASIC1.96□□□□□ -2.1
RAE1P78406 RNA5SP109-201ENST00000391010 116 ntBASIC1.96□□□□□ -2.1
RAE1P78406 COX6CP10-201ENST00000416832 224 ntBASIC1.96□□□□□ -2.1
RAE1P78406 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.96□□□□□ -2.1
RAE1P78406 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
RAE1P78406 AC233266.1-201ENST00000454518 96 ntBASIC1.96□□□□□ -2.1
RAE1P78406 RNU7-120P-201ENST00000459334 63 ntBASIC1.96□□□□□ -2.1
RAE1P78406 RNU2-56P-201ENST00000516826 190 ntBASIC1.96□□□□□ -2.1
RAE1P78406 IGKV3-31-201ENST00000523109 329 ntBASIC1.96□□□□□ -2.1
RAE1P78406 AP002392.1-201ENST00000537692 208 ntBASIC1.96□□□□□ -2.1
RAE1P78406 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.96□□□□□ -2.1
RAE1P78406 AC098479.1-201ENST00000609225 154 ntBASIC1.96□□□□□ -2.1
RAE1P78406 AC242852.1-201ENST00000612151 96 ntBASIC1.96□□□□□ -2.1
RAE1P78406 AC244015.1-201ENST00000622301 99 ntBASIC1.96□□□□□ -2.1
RAE1P78406 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RAE1P78406 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RAE1P78406 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RAE1P78406 Y_RNA.7-201ENST00000362352 102 ntBASIC1.95□□□□□ -2.1
RAE1P78406 Y_RNA.24-201ENST00000362508 103 ntBASIC1.95□□□□□ -2.1
RAE1P78406 Y_RNA.121-201ENST00000363309 113 ntBASIC1.95□□□□□ -2.1
RAE1P78406 RNU6-112P-201ENST00000363599 104 ntBASIC1.95□□□□□ -2.1
RAE1P78406 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
RAE1P78406 RNU6-1080P-201ENST00000383982 107 ntBASIC1.95□□□□□ -2.1
RAE1P78406 RNU6-296P-201ENST00000384608 107 ntBASIC1.95□□□□□ -2.1
RAE1P78406 RNU6-383P-201ENST00000410864 94 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms