Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 Y_RNA.483-201ENST00000384380 101 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 RNU6-136P-201ENST00000384663 107 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CLDN20P56880 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.67□□□□□ -2.14
CLDN20P56880 AL135790.2-201ENST00000437701 267 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 HSPE1P9-201ENST00000440046 311 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 RPL23AP42-201ENST00000471152 471 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.67□□□□□ -2.14
CLDN20P56880 AC136628.3-201ENST00000521868 290 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 DEFB108E-201ENST00000524692 240 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 AL512605.2-201ENST00000592972 256 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN20P56880 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CLDN20P56880 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CLDN20P56880 Y_RNA.237-201ENST00000364439 102 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 RNU6-1323P-201ENST00000384025 107 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 MIR764-201ENST00000390811 85 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 RNU6-360P-201ENST00000390944 104 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 AL591806.2-201ENST00000433122 173 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.66□□□□□ -2.14
CLDN20P56880 AC091959.1-201ENST00000495857 238 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 RPS29P11-201ENST00000496507 171 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 SCARNA24.2-201ENST00000516968 130 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 RNU6-1096P-201ENST00000517089 102 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 AL358944.1-201ENST00000528537 144 ntBASIC1.66□□□□□ -2.14
CLDN20P56880 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN20P56880 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLDN20P56880 RNU6-661P-201ENST00000362409 107 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 Y_RNA.267-201ENST00000364679 109 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 SNORA4.2-201ENST00000365313 147 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 RNU6-196P-201ENST00000384315 107 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 MIR9-3-201ENST00000385084 90 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 COX6CP10-201ENST00000416832 224 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 FTH1P12-201ENST00000432137 551 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 RPS4XP11-201ENST00000446897 772 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 snoU13.27-201ENST00000459278 104 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.65□□□□□ -2.15
CLDN20P56880 SNORA27.4-201ENST00000516650 95 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 RNU7-116P-201ENST00000516940 62 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 AP002004.2-201ENST00000531656 154 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.65□□□□□ -2.15
CLDN20P56880 AL078604.3-201ENST00000615580 211 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 MIR8054-201ENST00000620877 86 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 AC068647.2-201ENST00000637380 353 ntBASIC1.65□□□□□ -2.15
CLDN20P56880 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.65□□□□□ -2.15
CLDN20P56880 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.64□□□□□ -2.15
CLDN20P56880 RNU6-801P-201ENST00000364087 105 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 Y_RNA.288-201ENST00000364854 92 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 SNORA72.4-201ENST00000384174 132 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CLDN20P56880 RNU6-440P-201ENST00000390882 105 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 RN7SKP200-201ENST00000410564 320 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 CYCSP49-201ENST00000420810 319 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 HSPE1P21-201ENST00000438283 308 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 SNORA31.10-201ENST00000516482 106 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 RNU6-1291P-201ENST00000516591 104 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.64□□□□□ -2.15
CLDN20P56880 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.64□□□□□ -2.15
CLDN20P56880 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CLDN20P56880 AC100821.1-201ENST00000523153 2479 ntBASIC1.64□□□□□ -2.15
CLDN20P56880 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CLDN20P56880 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLDN20P56880 UBE2WP1-201ENST00000362030 340 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 Y_RNA.144-201ENST00000363521 113 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 SNORA72-201ENST00000384339 132 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 RNU6-463P-201ENST00000384340 107 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 SNORA26.9-201ENST00000391322 122 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 AC104332.1-201ENST00000440471 797 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.63□□□□□ -2.15
CLDN20P56880 RNU2-56P-201ENST00000516826 190 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 MIR4709-201ENST00000577272 72 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 AL162424.1-201ENST00000602325 221 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 AP003357.1-201ENST00000604497 148 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 U4.1-201ENST00000620349 87 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 7SK.10-201ENST00000621414 298 ntBASIC1.63□□□□□ -2.15
CLDN20P56880 SNORA1B-201ENST00000362535 133 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 Y_RNA.44-201ENST00000362676 108 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 SNORA26.5-201ENST00000391215 123 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 AC233266.1-201ENST00000454518 96 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN20P56880 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN20P56880 U8.19-201ENST00000459095 133 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN20P56880 AC107393.1-201ENST00000512403 346 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 Y_RNA.668-201ENST00000516233 93 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 RNU7-115P-201ENST00000516433 55 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 RNU7-28P-201ENST00000516759 62 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 AC011604.1-201ENST00000545978 196 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 MIR4503-201ENST00000582187 83 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 POLR3GP1-201ENST00000594073 261 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 AL929325.1-201ENST00000603096 117 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 SNORA28-201ENST00000606769 126 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN20P56880 AC242852.1-201ENST00000612151 96 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 U2.14-201ENST00000615943 113 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 MIR548AY-201ENST00000617669 107 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms