Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SNORD78.2-201ENST00000391076 69 ntBASIC1.23□□□□□ -2.21
VCPP55072 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.23□□□□□ -2.21
VCPP55072 AC236972.2-201ENST00000434979 310 ntBASIC1.23□□□□□ -2.21
VCPP55072 HAR1A.1-201ENST00000459583 118 ntBASIC1.23□□□□□ -2.21
VCPP55072 AL117351.2-201ENST00000513571 157 ntBASIC1.23□□□□□ -2.21
VCPP55072 RNU6-1012P-201ENST00000516606 109 ntBASIC1.23□□□□□ -2.21
VCPP55072 SNORD116.3-201ENST00000517176 78 ntBASIC1.23□□□□□ -2.21
VCPP55072 AC055872.1-201ENST00000570978 278 ntBASIC1.23□□□□□ -2.21
VCPP55072 MIR1273G-201ENST00000577677 100 ntBASIC1.23□□□□□ -2.21
VCPP55072 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
VCPP55072 AC040896.1-201ENST00000613819 479 ntBASIC1.23□□□□□ -2.21
VCPP55072 AC127459.3-201ENST00000624328 466 ntBASIC1.23□□□□□ -2.21
VCPP55072 SNORD114-7-201ENST00000362520 77 ntBASIC1.22□□□□□ -2.21
VCPP55072 Y_RNA.146-201ENST00000363549 102 ntBASIC1.22□□□□□ -2.21
VCPP55072 RNU6-376P-201ENST00000384731 106 ntBASIC1.22□□□□□ -2.21
VCPP55072 PGBD4P5-201ENST00000445958 426 ntBASIC1.22□□□□□ -2.21
VCPP55072 CHEK2P4-201ENST00000450340 246 ntBASIC1.22□□□□□ -2.21
VCPP55072 AC091021.1-201ENST00000468051 388 ntBASIC1.22□□□□□ -2.21
VCPP55072 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
VCPP55072 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
VCPP55072 RNU6-1278P-201ENST00000516130 107 ntBASIC1.22□□□□□ -2.21
VCPP55072 RNU2-12P-201ENST00000517216 168 ntBASIC1.22□□□□□ -2.21
VCPP55072 SUMO2P16-201ENST00000519475 264 ntBASIC1.22□□□□□ -2.21
VCPP55072 AC091178.2-201ENST00000584401 117 ntBASIC1.22□□□□□ -2.21
VCPP55072 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.22□□□□□ -2.21
VCPP55072 MIR373-201ENST00000362273 69 ntBASIC1.21□□□□□ -2.22
VCPP55072 Y_RNA.58-201ENST00000362807 102 ntBASIC1.21□□□□□ -2.22
VCPP55072 Y_RNA.115-201ENST00000363272 98 ntBASIC1.21□□□□□ -2.22
VCPP55072 Y_RNA.154-201ENST00000363624 102 ntBASIC1.21□□□□□ -2.22
VCPP55072 SNORD115-30-201ENST00000364117 82 ntBASIC1.21□□□□□ -2.22
VCPP55072 RNY3P1-201ENST00000365085 102 ntBASIC1.21□□□□□ -2.22
VCPP55072 RNU6-117P-201ENST00000365415 107 ntBASIC1.21□□□□□ -2.22
VCPP55072 RNY3-201ENST00000365484 102 ntBASIC1.21□□□□□ -2.22
VCPP55072 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.21□□□□□ -2.22
VCPP55072 RNU6-708P-201ENST00000384217 107 ntBASIC1.21□□□□□ -2.22
VCPP55072 MIR562-201ENST00000384894 95 ntBASIC1.21□□□□□ -2.22
VCPP55072 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
VCPP55072 SNX2P2-201ENST00000424553 323 ntBASIC1.21□□□□□ -2.22
VCPP55072 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.21□□□□□ -2.22
VCPP55072 STAG3L5P-204ENST00000443759 179 ntBASIC1.21□□□□□ -2.22
VCPP55072 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
VCPP55072 RNU6-341P-201ENST00000516973 96 ntBASIC1.21□□□□□ -2.22
VCPP55072 AC006600.1-201ENST00000572529 153 ntBASIC1.21□□□□□ -2.22
VCPP55072 MIR4659A-201ENST00000580269 81 ntBASIC1.21□□□□□ -2.22
VCPP55072 VN1R91P-201ENST00000594377 169 ntBASIC1.21□□□□□ -2.22
VCPP55072 SNORA28-201ENST00000606769 126 ntBASIC1.21□□□□□ -2.22
VCPP55072 AL365434.2-201ENST00000607979 234 ntBASIC1.21□□□□□ -2.22
VCPP55072 AC011476.5-201ENST00000615594 130 ntBASIC1.21□□□□□ -2.22
VCPP55072 AC073349.3-201ENST00000617616 186 ntBASIC1.21□□□□□ -2.22
VCPP55072 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.21□□□□□ -2.22
VCPP55072 AL513423.1-201ENST00000621695 132 ntBASIC1.21□□□□□ -2.22
VCPP55072 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
VCPP55072 RNU6-1115P-201ENST00000362490 106 ntBASIC1.2□□□□□ -2.22
VCPP55072 Y_RNA.27-201ENST00000362540 103 ntBASIC1.2□□□□□ -2.22
VCPP55072 Y_RNA.101-201ENST00000363154 102 ntBASIC1.2□□□□□ -2.22
VCPP55072 RNU6-626P-201ENST00000363354 107 ntBASIC1.2□□□□□ -2.22
VCPP55072 Y_RNA.267-201ENST00000364679 109 ntBASIC1.2□□□□□ -2.22
VCPP55072 Y_RNA.361-201ENST00000365515 120 ntBASIC1.2□□□□□ -2.22
VCPP55072 RNU6-20P-201ENST00000384106 107 ntBASIC1.2□□□□□ -2.22
VCPP55072 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
VCPP55072 AF228730.4-201ENST00000421457 183 ntBASIC1.2□□□□□ -2.22
VCPP55072 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
VCPP55072 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.2□□□□□ -2.22
VCPP55072 MTND3P22-201ENST00000510932 243 ntBASIC1.2□□□□□ -2.22
VCPP55072 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
VCPP55072 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.2□□□□□ -2.22
VCPP55072 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.2□□□□□ -2.22
VCPP55072 AC005176.2-201ENST00000596933 147 ntBASIC1.2□□□□□ -2.22
VCPP55072 AC006380.1-201ENST00000603598 186 ntBASIC1.2□□□□□ -2.22
VCPP55072 Y_RNA.804-201ENST00000615262 101 ntBASIC1.2□□□□□ -2.22
VCPP55072 AC240442.1-201ENST00000616055 283 ntBASIC1.2□□□□□ -2.22
VCPP55072 MIR8065-201ENST00000620577 100 ntBASIC1.2□□□□□ -2.22
VCPP55072 AC091925.1-201ENST00000623204 462 ntBASIC1.2□□□□□ -2.22
VCPP55072 MIR4272-201ENST00000635924 64 ntBASIC1.2□□□□□ -2.22
VCPP55072 U6.92-201ENST00000636464 89 ntBASIC1.2□□□□□ -2.22
VCPP55072 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VCPP55072 Y_RNA.265-201ENST00000364677 108 ntBASIC1.19□□□□□ -2.22
VCPP55072 Y_RNA.496-201ENST00000384444 101 ntBASIC1.19□□□□□ -2.22
VCPP55072 RNU2-54P-201ENST00000410299 190 ntBASIC1.19□□□□□ -2.22
VCPP55072 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.19□□□□□ -2.22
VCPP55072 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.19□□□□□ -2.22
VCPP55072 RNU6-63P-201ENST00000516690 95 ntBASIC1.19□□□□□ -2.22
VCPP55072 RNU2-56P-201ENST00000516826 190 ntBASIC1.19□□□□□ -2.22
VCPP55072 AL512310.8-201ENST00000550183 120 ntBASIC1.19□□□□□ -2.22
VCPP55072 AP001094.1-201ENST00000579805 193 ntBASIC1.19□□□□□ -2.22
VCPP55072 AL590095.2-201ENST00000604136 117 ntBASIC1.19□□□□□ -2.22
VCPP55072 AC211469.2-201ENST00000605461 205 ntBASIC1.19□□□□□ -2.22
VCPP55072 AL020996.3-201ENST00000606617 222 ntBASIC1.19□□□□□ -2.22
VCPP55072 SNORD3E-202ENST00000627253 216 ntBASIC1.19□□□□□ -2.22
VCPP55072 SNORA1B-201ENST00000362535 133 ntBASIC1.18□□□□□ -2.22
VCPP55072 RNU4-73P-201ENST00000363164 141 ntBASIC1.18□□□□□ -2.22
VCPP55072 RNU6-136P-201ENST00000384663 107 ntBASIC1.18□□□□□ -2.22
VCPP55072 MIR520G-201ENST00000385064 90 ntBASIC1.18□□□□□ -2.22
VCPP55072 MIR660-201ENST00000385235 97 ntBASIC1.18□□□□□ -2.22
VCPP55072 RNU5A-5P-201ENST00000411054 116 ntBASIC1.18□□□□□ -2.22
VCPP55072 Y_RNA.661-201ENST00000516003 99 ntBASIC1.18□□□□□ -2.22
VCPP55072 SNORA70.12-201ENST00000516084 153 ntBASIC1.18□□□□□ -2.22
VCPP55072 RNU6-1291P-201ENST00000516591 104 ntBASIC1.18□□□□□ -2.22
VCPP55072 RNU7-28P-201ENST00000516759 62 ntBASIC1.18□□□□□ -2.22
VCPP55072 AP002004.2-201ENST00000531656 154 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms