Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DEFB117-201ENST00000602356 141 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 AC005828.6-201ENST00000606610 232 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 U6.115-201ENST00000636045 103 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.6□□□□□ -2.15
LIMK2P53671 RNU6-112P-201ENST00000363599 104 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 Y_RNA.329-201ENST00000365209 107 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 Y_RNA.352-201ENST00000365439 102 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 Y_RNA.361-201ENST00000365515 120 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 Y_RNA.489-201ENST00000384410 101 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
LIMK2P53671 SNORA53-201ENST00000391141 249 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 AL603910.2-201ENST00000407268 136 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 MIR548H3-201ENST00000408771 118 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 RNU6-57P-201ENST00000411348 103 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 AC060773.1-201ENST00000421698 310 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 MTCO1P5-201ENST00000433573 344 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 AC099677.2-201ENST00000436385 175 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 AC010409.1-201ENST00000487382 476 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.59□□□□□ -2.15
LIMK2P53671 AC006380.1-201ENST00000603598 186 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 AC069114.2-201ENST00000604699 304 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 AL353149.1-201ENST00000610667 244 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 U2.14-201ENST00000615943 113 ntBASIC1.59□□□□□ -2.15
LIMK2P53671 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
LIMK2P53671 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LIMK2P53671 Y_RNA.20-201ENST00000362479 113 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 RNU6-1266P-201ENST00000362794 105 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 RNU6-862P-201ENST00000362804 105 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 RNU4-80P-201ENST00000363200 141 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 Y_RNA.164-201ENST00000363709 102 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 Y_RNA.478-201ENST00000384358 107 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 Y_RNA.539-201ENST00000384635 107 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 AL031003.1-201ENST00000404229 172 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 AC016909.1-201ENST00000415916 166 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 AC091959.1-201ENST00000495857 238 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 AC011406.1-201ENST00000512440 370 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 RNU6-1041P-201ENST00000516254 102 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 RNU6-388P-201ENST00000517012 105 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 RNU6-389P-201ENST00000517048 105 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 AC025647.1-201ENST00000517879 253 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 RPL21P9-201ENST00000556149 474 ntBASIC1.58□□□□□ -2.16
LIMK2P53671 SNORA25.1-201ENST00000362326 128 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 SNORD27-201ENST00000363981 72 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 Y_RNA.238-201ENST00000364441 102 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 Y_RNA.277-201ENST00000364754 102 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 SNORA20.1-201ENST00000364790 130 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 SNORD58.1-201ENST00000391313 66 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 AL117342.1-201ENST00000404861 406 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 AL355796.1-201ENST00000406706 323 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 SNORD65B-201ENST00000459126 73 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 RNU6-191P-201ENST00000516295 94 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 SNORA31.17-201ENST00000516953 127 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 RNU6-111P-201ENST00000517179 105 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 DNAJC19P9-201ENST00000555084 351 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 MIR4643-201ENST00000577473 78 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 AC005357.1-201ENST00000588399 301 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 AC037487.3-201ENST00000606668 112 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 AC090425.1-201ENST00000610007 140 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 AC078938.1-201ENST00000620993 318 ntBASIC1.57□□□□□ -2.16
LIMK2P53671 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.57□□□□□ -2.16
LIMK2P53671 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
LIMK2P53671 Y_RNA.44-201ENST00000362676 108 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 RNU6-324P-201ENST00000363957 106 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 RNU1-96P-201ENST00000364163 162 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 RNU6-1318P-201ENST00000365389 103 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 SNORA20B-201ENST00000384220 132 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 RNU6-296P-201ENST00000384608 107 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 RNU2-61P-201ENST00000411069 191 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 CST2P1-201ENST00000425770 87 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 AC108059.2-201ENST00000434626 151 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.56□□□□□ -2.16
LIMK2P53671 MIR3684-201ENST00000579779 74 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 AL512598.1-201ENST00000610158 273 ntBASIC1.56□□□□□ -2.16
LIMK2P53671 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMK2P53671 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMK2P53671 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LIMK2P53671 UBE2WP1-201ENST00000362030 340 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 Y_RNA.54-201ENST00000362766 105 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 Y_RNA.124-201ENST00000363339 93 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 RNU6-1019P-201ENST00000364424 107 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 Y_RNA.275-201ENST00000364726 110 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 RNU6-740P-201ENST00000364734 105 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 RNU6-338P-201ENST00000383888 105 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 RNU6-514P-201ENST00000384208 107 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 MIR30A-201ENST00000385092 71 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 AL135790.2-201ENST00000437701 267 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 SUMO1P2-201ENST00000452524 304 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 SNORA27.4-201ENST00000516650 95 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 RNU6-794P-201ENST00000517261 64 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 BX248123.2-201ENST00000606318 124 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 BX284668.6-201ENST00000606899 438 ntBASIC1.55□□□□□ -2.16
LIMK2P53671 MIR338-201ENST00000636369 67 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms