Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR338-201ENST00000636369 67 ntBASIC2.2□□□□□ -2.06
COPB1P53618 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.2□□□□□ -2.06
COPB1P53618 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COPB1P53618 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
COPB1P53618 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COPB1P53618 SNORD114-1-201ENST00000362705 72 ntBASIC2.19□□□□□ -2.06
COPB1P53618 RNU6-1323P-201ENST00000384025 107 ntBASIC2.19□□□□□ -2.06
COPB1P53618 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
COPB1P53618 RNA5SP511-201ENST00000410487 115 ntBASIC2.19□□□□□ -2.06
COPB1P53618 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
COPB1P53618 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.19□□□□□ -2.06
COPB1P53618 AC107393.1-201ENST00000512403 346 ntBASIC2.19□□□□□ -2.06
COPB1P53618 AC097462.1-201ENST00000514125 324 ntBASIC2.19□□□□□ -2.06
COPB1P53618 RNU6-1041P-201ENST00000516254 102 ntBASIC2.19□□□□□ -2.06
COPB1P53618 RNU7-115P-201ENST00000516433 55 ntBASIC2.19□□□□□ -2.06
COPB1P53618 RNU7-128P-201ENST00000517247 62 ntBASIC2.19□□□□□ -2.06
COPB1P53618 AC100767.1-201ENST00000528178 123 ntBASIC2.19□□□□□ -2.06
COPB1P53618 AL137100.2-201ENST00000555786 315 ntBASIC2.19□□□□□ -2.06
COPB1P53618 AC015712.3-201ENST00000559380 164 ntBASIC2.19□□□□□ -2.06
COPB1P53618 AC015720.1-201ENST00000565251 277 ntBASIC2.19□□□□□ -2.06
COPB1P53618 MIR3169-201ENST00000578032 83 ntBASIC2.19□□□□□ -2.06
COPB1P53618 MIR3935-201ENST00000583472 104 ntBASIC2.19□□□□□ -2.06
COPB1P53618 AP003357.1-201ENST00000604497 148 ntBASIC2.19□□□□□ -2.06
COPB1P53618 AC012640.5-201ENST00000623897 319 ntBASIC2.19□□□□□ -2.06
COPB1P53618 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COPB1P53618 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COPB1P53618 RNU6-923P-201ENST00000364753 107 ntBASIC2.18□□□□□ -2.06
COPB1P53618 RNU6-417P-201ENST00000384712 107 ntBASIC2.18□□□□□ -2.06
COPB1P53618 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
COPB1P53618 HMGN2P3-201ENST00000433603 273 ntBASIC2.18□□□□□ -2.06
COPB1P53618 AL162725.1-201ENST00000435405 301 ntBASIC2.18□□□□□ -2.06
COPB1P53618 HMGN2P5-201ENST00000436882 273 ntBASIC2.18□□□□□ -2.06
COPB1P53618 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.18□□□□□ -2.06
COPB1P53618 AC010409.1-201ENST00000487382 476 ntBASIC2.18□□□□□ -2.06
COPB1P53618 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.18□□□□□ -2.06
COPB1P53618 AC026271.5-201ENST00000577873 130 ntBASIC2.18□□□□□ -2.06
COPB1P53618 SNRPGP19-201ENST00000603826 189 ntBASIC2.18□□□□□ -2.06
COPB1P53618 AC005972.2-201ENST00000604690 348 ntBASIC2.18□□□□□ -2.06
COPB1P53618 AC022513.1-201ENST00000624512 117 ntBASIC2.18□□□□□ -2.06
COPB1P53618 AC068647.2-201ENST00000637380 353 ntBASIC2.18□□□□□ -2.06
COPB1P53618 U6.108-201ENST00000637764 58 ntBASIC2.18□□□□□ -2.06
COPB1P53618 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
COPB1P53618 RNU6-1020P-201ENST00000363684 107 ntBASIC2.17□□□□□ -2.06
COPB1P53618 Y_RNA.308-201ENST00000365043 101 ntBASIC2.17□□□□□ -2.06
COPB1P53618 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.17□□□□□ -2.06
COPB1P53618 Y_RNA.435-201ENST00000384095 112 ntBASIC2.17□□□□□ -2.06
COPB1P53618 SNORA67.3-201ENST00000384366 140 ntBASIC2.17□□□□□ -2.06
COPB1P53618 Y_RNA.555-201ENST00000384673 110 ntBASIC2.17□□□□□ -2.06
COPB1P53618 MIR1253-201ENST00000408273 105 ntBASIC2.17□□□□□ -2.06
COPB1P53618 MIR1289-2-201ENST00000408360 111 ntBASIC2.17□□□□□ -2.06
COPB1P53618 AC245102.2-201ENST00000448956 180 ntBASIC2.17□□□□□ -2.06
COPB1P53618 AC117454.1-201ENST00000491120 168 ntBASIC2.17□□□□□ -2.06
COPB1P53618 RNU6-1146P-201ENST00000516282 102 ntBASIC2.17□□□□□ -2.06
COPB1P53618 RNA5SP137-201ENST00000516833 135 ntBASIC2.17□□□□□ -2.06
COPB1P53618 RNU7-172P-201ENST00000517125 64 ntBASIC2.17□□□□□ -2.06
COPB1P53618 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.17□□□□□ -2.06
COPB1P53618 AP002392.1-201ENST00000537692 208 ntBASIC2.17□□□□□ -2.06
COPB1P53618 MIR548AY-201ENST00000617669 107 ntBASIC2.17□□□□□ -2.06
COPB1P53618 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
COPB1P53618 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
COPB1P53618 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
COPB1P53618 RNU6-682P-201ENST00000363843 106 ntBASIC2.16□□□□□ -2.06
COPB1P53618 SNORA64-201ENST00000384674 134 ntBASIC2.16□□□□□ -2.06
COPB1P53618 MIR626-201ENST00000385032 94 ntBASIC2.16□□□□□ -2.06
COPB1P53618 RNU6-493P-201ENST00000391321 108 ntBASIC2.16□□□□□ -2.06
COPB1P53618 PCNPP3-201ENST00000393579 471 ntBASIC2.16□□□□□ -2.06
COPB1P53618 COX6CP10-201ENST00000416832 224 ntBASIC2.16□□□□□ -2.06
COPB1P53618 EBAG9P1-201ENST00000418955 543 ntBASIC2.16□□□□□ -2.06
COPB1P53618 AC010154.1-201ENST00000425857 269 ntBASIC2.16□□□□□ -2.06
COPB1P53618 HSPE1P21-201ENST00000438283 308 ntBASIC2.16□□□□□ -2.06
COPB1P53618 RPS27P21-201ENST00000486977 252 ntBASIC2.16□□□□□ -2.06
COPB1P53618 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.16□□□□□ -2.06
COPB1P53618 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.16□□□□□ -2.06
COPB1P53618 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
COPB1P53618 AC022559.1-201ENST00000520905 205 ntBASIC2.16□□□□□ -2.06
COPB1P53618 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
COPB1P53618 RNU4-10P-201ENST00000364383 140 ntBASIC2.15□□□□□ -2.07
COPB1P53618 RNU6-144P-201ENST00000383951 107 ntBASIC2.15□□□□□ -2.07
COPB1P53618 RNU6-209P-201ENST00000384118 107 ntBASIC2.15□□□□□ -2.07
COPB1P53618 RNU6-886P-201ENST00000384319 105 ntBASIC2.15□□□□□ -2.07
COPB1P53618 RNA5SP467-201ENST00000391274 118 ntBASIC2.15□□□□□ -2.07
COPB1P53618 SUMO2P12-201ENST00000405924 140 ntBASIC2.15□□□□□ -2.07
COPB1P53618 AC099677.2-201ENST00000436385 175 ntBASIC2.15□□□□□ -2.07
COPB1P53618 ATP5J2P3-201ENST00000451550 258 ntBASIC2.15□□□□□ -2.07
COPB1P53618 RNU7-99P-201ENST00000516271 62 ntBASIC2.15□□□□□ -2.07
COPB1P53618 RNU6-548P-201ENST00000517083 115 ntBASIC2.15□□□□□ -2.07
COPB1P53618 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.15□□□□□ -2.07
COPB1P53618 AC127455.1-201ENST00000565496 145 ntBASIC2.15□□□□□ -2.07
COPB1P53618 MIR3126-201ENST00000577443 74 ntBASIC2.15□□□□□ -2.07
COPB1P53618 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
COPB1P53618 POLR3GP1-201ENST00000594073 261 ntBASIC2.15□□□□□ -2.07
COPB1P53618 AC072026.1-201ENST00000605023 201 ntBASIC2.15□□□□□ -2.07
COPB1P53618 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.15□□□□□ -2.07
COPB1P53618 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COPB1P53618 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.15□□□□□ -2.07
COPB1P53618 RNU1-58P-201ENST00000362413 163 ntBASIC2.14□□□□□ -2.07
COPB1P53618 Y_RNA.150-201ENST00000363562 102 ntBASIC2.14□□□□□ -2.07
COPB1P53618 RNU6-1205P-201ENST00000363625 106 ntBASIC2.14□□□□□ -2.07
COPB1P53618 SNORA33-201ENST00000363664 130 ntBASIC2.14□□□□□ -2.07
COPB1P53618 Y_RNA.180-201ENST00000363867 113 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms