Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 RNU6-1291P-201ENST00000516591 104 ntBASIC1.91□□□□□ -2.1
RFX2P48378 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
RFX2P48378 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
RFX2P48378 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
RFX2P48378 MIR4744-201ENST00000581563 82 ntBASIC1.91□□□□□ -2.1
RFX2P48378 MIR5007-201ENST00000583098 95 ntBASIC1.91□□□□□ -2.1
RFX2P48378 AC108706.1-201ENST00000611053 297 ntBASIC1.91□□□□□ -2.1
RFX2P48378 AC022513.1-201ENST00000624512 117 ntBASIC1.91□□□□□ -2.1
RFX2P48378 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.91□□□□□ -2.1
RFX2P48378 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
RFX2P48378 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
RFX2P48378 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RFX2P48378 Y_RNA.75-201ENST00000362927 97 ntBASIC1.9□□□□□ -2.11
RFX2P48378 RNU4-41P-201ENST00000364426 143 ntBASIC1.9□□□□□ -2.11
RFX2P48378 Y_RNA.333-201ENST00000365274 102 ntBASIC1.9□□□□□ -2.11
RFX2P48378 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
RFX2P48378 MIR597-201ENST00000384968 97 ntBASIC1.9□□□□□ -2.11
RFX2P48378 MIR616-201ENST00000385293 97 ntBASIC1.9□□□□□ -2.11
RFX2P48378 RNU6-578P-201ENST00000390980 103 ntBASIC1.9□□□□□ -2.11
RFX2P48378 MIR548M-201ENST00000408260 86 ntBASIC1.9□□□□□ -2.11
RFX2P48378 Y_RNA.621-201ENST00000411065 96 ntBASIC1.9□□□□□ -2.11
RFX2P48378 RNU6-1135P-201ENST00000411083 103 ntBASIC1.9□□□□□ -2.11
RFX2P48378 AC099677.2-201ENST00000436385 175 ntBASIC1.9□□□□□ -2.11
RFX2P48378 AC233266.1-201ENST00000454518 96 ntBASIC1.9□□□□□ -2.11
RFX2P48378 TRBV12-1-201ENST00000479785 344 ntBASIC1.9□□□□□ -2.11
RFX2P48378 RNU1-142P-201ENST00000516682 145 ntBASIC1.9□□□□□ -2.11
RFX2P48378 RNU6-1212P-201ENST00000517023 104 ntBASIC1.9□□□□□ -2.11
RFX2P48378 GTF3AP2-201ENST00000557014 266 ntBASIC1.9□□□□□ -2.11
RFX2P48378 SNORD14A-201ENST00000606526 91 ntBASIC1.9□□□□□ -2.11
RFX2P48378 AC103810.6-201ENST00000606708 136 ntBASIC1.9□□□□□ -2.11
RFX2P48378 AC046143.2-201ENST00000609789 160 ntBASIC1.9□□□□□ -2.11
RFX2P48378 AC242852.1-201ENST00000612151 96 ntBASIC1.9□□□□□ -2.11
RFX2P48378 AC244015.1-201ENST00000622301 99 ntBASIC1.9□□□□□ -2.11
RFX2P48378 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RFX2P48378 RNU1-58P-201ENST00000362413 163 ntBASIC1.89□□□□□ -2.11
RFX2P48378 RNU6-103P-201ENST00000363686 107 ntBASIC1.89□□□□□ -2.11
RFX2P48378 Y_RNA.203-201ENST00000364106 102 ntBASIC1.89□□□□□ -2.11
RFX2P48378 Y_RNA.267-201ENST00000364679 109 ntBASIC1.89□□□□□ -2.11
RFX2P48378 RNU6-275P-201ENST00000364910 107 ntBASIC1.89□□□□□ -2.11
RFX2P48378 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
RFX2P48378 AL606845.1-201ENST00000404881 255 ntBASIC1.89□□□□□ -2.11
RFX2P48378 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
RFX2P48378 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.89□□□□□ -2.11
RFX2P48378 RNU6-561P-201ENST00000516222 102 ntBASIC1.89□□□□□ -2.11
RFX2P48378 RNA5SP24-201ENST00000516478 95 ntBASIC1.89□□□□□ -2.11
RFX2P48378 MTND5P41-201ENST00000517498 206 ntBASIC1.89□□□□□ -2.11
RFX2P48378 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.89□□□□□ -2.11
RFX2P48378 MIR5688-201ENST00000580619 83 ntBASIC1.89□□□□□ -2.11
RFX2P48378 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
RFX2P48378 MIR6079-201ENST00000635807 62 ntBASIC1.89□□□□□ -2.11
RFX2P48378 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
RFX2P48378 AL365361.1-201ENST00000566942 3481 ntBASIC1.88□□□□□ -2.11
RFX2P48378 AC100821.1-201ENST00000523153 2479 ntBASIC1.88□□□□□ -2.11
RFX2P48378 Y_RNA.170-201ENST00000363746 110 ntBASIC1.88□□□□□ -2.11
RFX2P48378 RNU6-674P-201ENST00000363831 107 ntBASIC1.88□□□□□ -2.11
RFX2P48378 RNU6-312P-201ENST00000364629 107 ntBASIC1.88□□□□□ -2.11
RFX2P48378 RNU6-1080P-201ENST00000383982 107 ntBASIC1.88□□□□□ -2.11
RFX2P48378 MIR196B-201ENST00000384852 84 ntBASIC1.88□□□□□ -2.11
RFX2P48378 MIR520G-201ENST00000385064 90 ntBASIC1.88□□□□□ -2.11
RFX2P48378 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RFX2P48378 RNU6-394P-201ENST00000410735 107 ntBASIC1.88□□□□□ -2.11
RFX2P48378 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX2P48378 CST2P1-201ENST00000425770 87 ntBASIC1.88□□□□□ -2.11
RFX2P48378 AC063976.3-201ENST00000426849 329 ntBASIC1.88□□□□□ -2.11
RFX2P48378 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX2P48378 RPS27P21-201ENST00000486977 252 ntBASIC1.88□□□□□ -2.11
RFX2P48378 AL163195.1-201ENST00000496941 348 ntBASIC1.88□□□□□ -2.11
RFX2P48378 MIR514B-201ENST00000516774 80 ntBASIC1.88□□□□□ -2.11
RFX2P48378 AC109810.1-201ENST00000534066 224 ntBASIC1.88□□□□□ -2.11
RFX2P48378 MIR3144-201ENST00000579460 79 ntBASIC1.88□□□□□ -2.11
RFX2P48378 MIR3133-201ENST00000583157 78 ntBASIC1.88□□□□□ -2.11
RFX2P48378 AC091178.2-201ENST00000584401 117 ntBASIC1.88□□□□□ -2.11
RFX2P48378 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.88□□□□□ -2.11
RFX2P48378 AL391903.3-201ENST00000612158 163 ntBASIC1.88□□□□□ -2.11
RFX2P48378 AC009831.4-201ENST00000620744 325 ntBASIC1.88□□□□□ -2.11
RFX2P48378 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RFX2P48378 AC018630.2-201ENST00000534866 2403 ntBASIC1.88□□□□□ -2.11
RFX2P48378 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RFX2P48378 AL359851.1-201ENST00000569460 4997 ntBASIC1.88□□□□□ -2.11
RFX2P48378 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
RFX2P48378 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
RFX2P48378 MIR208A-201ENST00000362287 71 ntBASIC1.87□□□□□ -2.11
RFX2P48378 Y_RNA.23-201ENST00000362496 106 ntBASIC1.87□□□□□ -2.11
RFX2P48378 SNORA3A-201ENST00000364113 130 ntBASIC1.87□□□□□ -2.11
RFX2P48378 Y_RNA.272-201ENST00000364696 102 ntBASIC1.87□□□□□ -2.11
RFX2P48378 Y_RNA.398-201ENST00000383952 99 ntBASIC1.87□□□□□ -2.11
RFX2P48378 RNU11-3P-201ENST00000391111 133 ntBASIC1.87□□□□□ -2.11
RFX2P48378 Y_RNA.587-201ENST00000391210 103 ntBASIC1.87□□□□□ -2.11
RFX2P48378 SNORA11.1-201ENST00000408133 129 ntBASIC1.87□□□□□ -2.11
RFX2P48378 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
RFX2P48378 AC107083.1-201ENST00000439643 279 ntBASIC1.87□□□□□ -2.11
RFX2P48378 AL121914.1-201ENST00000450188 156 ntBASIC1.87□□□□□ -2.11
RFX2P48378 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
RFX2P48378 RNA5SP137-201ENST00000516833 135 ntBASIC1.87□□□□□ -2.11
RFX2P48378 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RFX2P48378 RPL23AP91-201ENST00000569211 455 ntBASIC1.87□□□□□ -2.11
RFX2P48378 AL049861.1-201ENST00000603130 150 ntBASIC1.87□□□□□ -2.11
RFX2P48378 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.87□□□□□ -2.11
RFX2P48378 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.87□□□□□ -2.11
RFX2P48378 AC012640.5-201ENST00000623897 319 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms