Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 Y_RNA.377-201ENST00000365644 108 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 RNY1P4-201ENST00000384595 115 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 Y_RNA.565-201ENST00000384719 101 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 AL353813.1-201ENST00000440700 253 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 AC112771.1-201ENST00000463581 102 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 Y_RNA.659-201ENST00000515994 113 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 SCARNA20.6-201ENST00000517251 106 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.31□□□□□ -1.88
CHRNA4P43681 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA4P43681 MIR548BB-201ENST00000626714 66 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 MIR203B-201ENST00000636080 86 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA4P43681 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA4P43681 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CHRNA4P43681 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA4P43681 RNU6-509P-201ENST00000363519 107 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 MIR605-201ENST00000385078 83 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 Y_RNA.621-201ENST00000411065 96 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 AC099677.2-201ENST00000436385 175 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 SCGB1D5P-201ENST00000515134 247 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 MIR449C-201ENST00000516047 92 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 AC079598.5-201ENST00000547460 117 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA4P43681 Y_RNA.773-201ENST00000607168 90 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 AL359075.3-201ENST00000613288 217 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 U4atac.1-201ENST00000618345 95 ntBASIC3.3□□□□□ -1.88
CHRNA4P43681 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA4P43681 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.3□□□□□ -1.88
CHRNA4P43681 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA4P43681 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHRNA4P43681 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHRNA4P43681 AC010889.1-201ENST00000566193 2666 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.29□□□□□ -1.88
CHRNA4P43681 AL049781.1-201ENST00000623195 3585 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 SNORD116-10-201ENST00000363791 102 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 RNU6-1229P-201ENST00000364295 107 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 SNORA14A-201ENST00000364773 135 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 RNU6-234P-201ENST00000365229 104 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 MIR548O-201ENST00000408583 114 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 CST9LP2-201ENST00000437612 320 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 RPL32P34-201ENST00000486380 400 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 AC013412.1-201ENST00000610687 192 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 MIR7975-201ENST00000619350 68 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 AF117829.1-206ENST00000621883 3802 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHRNA4P43681 Z83843.1-201ENST00000604070 3685 ntBASIC3.29□□□□□ -1.88
CHRNA4P43681 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHRNA4P43681 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHRNA4P43681 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CHRNA4P43681 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHRNA4P43681 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHRNA4P43681 Y_RNA.467-201ENST00000384297 102 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 MIR1294-201ENST00000408503 142 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 RNU4-69P-201ENST00000410677 143 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 AC006539.3-201ENST00000454258 129 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 RPS23P4-201ENST00000487908 423 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 RNU2-34P-201ENST00000516534 121 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.28□□□□□ -1.88
CHRNA4P43681 MIR4474-201ENST00000579189 78 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 AC064859.1-201ENST00000624741 174 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 SCARNA15.3-201ENST00000626315 122 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.28□□□□□ -1.88
CHRNA4P43681 SCARNA4.1-201ENST00000628597 123 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.28□□□□□ -1.88
CHRNA4P43681 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CHRNA4P43681 ZNF271P-202ENST00000465539 1970 ntBASIC3.28□□□□□ -1.88
CHRNA4P43681 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.28□□□□□ -1.88
CHRNA4P43681 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CHRNA4P43681 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CHRNA4P43681 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CHRNA4P43681 RNU6-590P-201ENST00000365039 107 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 Y_RNA.440-201ENST00000384120 114 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 RNU2-40P-201ENST00000410833 196 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.27□□□□□ -1.89
CHRNA4P43681 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 MIR4778-201ENST00000577635 80 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 MIR4712-201ENST00000583750 82 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 U1.23-201ENST00000610293 146 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 RNU1-68P-201ENST00000615382 146 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 U1.39-201ENST00000621562 146 ntBASIC3.27□□□□□ -1.89
CHRNA4P43681 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.27□□□□□ -1.89
CHRNA4P43681 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHRNA4P43681 Y_RNA.37-201ENST00000362606 108 ntBASIC3.26□□□□□ -1.89
CHRNA4P43681 SNORD115-28-201ENST00000363931 81 ntBASIC3.26□□□□□ -1.89
CHRNA4P43681 Y_RNA.191-201ENST00000363972 113 ntBASIC3.26□□□□□ -1.89
CHRNA4P43681 RNU6-679P-201ENST00000391003 106 ntBASIC3.26□□□□□ -1.89
CHRNA4P43681 SNORA48.8-201ENST00000391324 134 ntBASIC3.26□□□□□ -1.89
CHRNA4P43681 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.26□□□□□ -1.89
CHRNA4P43681 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.26□□□□□ -1.89
CHRNA4P43681 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
CHRNA4P43681 MIR3609-201ENST00000582661 80 ntBASIC3.26□□□□□ -1.89
CHRNA4P43681 AC022217.4-201ENST00000604389 163 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms