Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.45□□□□□ -2.18
SOX3P41225 AC245047.3-201ENST00000429428 127 ntBASIC1.45□□□□□ -2.18
SOX3P41225 AL162725.1-201ENST00000435405 301 ntBASIC1.45□□□□□ -2.18
SOX3P41225 HSPE1P21-201ENST00000438283 308 ntBASIC1.45□□□□□ -2.18
SOX3P41225 DYNLT3P2-201ENST00000442517 295 ntBASIC1.45□□□□□ -2.18
SOX3P41225 AC091021.1-201ENST00000468051 388 ntBASIC1.45□□□□□ -2.18
SOX3P41225 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.45□□□□□ -2.18
SOX3P41225 RNY3P15-201ENST00000516297 97 ntBASIC1.45□□□□□ -2.18
SOX3P41225 RNU6-341P-201ENST00000516973 96 ntBASIC1.45□□□□□ -2.18
SOX3P41225 AL117187.1-201ENST00000555482 181 ntBASIC1.45□□□□□ -2.18
SOX3P41225 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
SOX3P41225 BX248123.2-201ENST00000606318 124 ntBASIC1.45□□□□□ -2.18
SOX3P41225 MIR8074-201ENST00000615081 81 ntBASIC1.45□□□□□ -2.18
SOX3P41225 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.45□□□□□ -2.18
SOX3P41225 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.45□□□□□ -2.18
SOX3P41225 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SOX3P41225 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SOX3P41225 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SOX3P41225 RNU6-1309P-201ENST00000363305 108 ntBASIC1.44□□□□□ -2.18
SOX3P41225 Y_RNA.459-201ENST00000384251 102 ntBASIC1.44□□□□□ -2.18
SOX3P41225 RNU6-136P-201ENST00000384663 107 ntBASIC1.44□□□□□ -2.18
SOX3P41225 MIR520G-201ENST00000385064 90 ntBASIC1.44□□□□□ -2.18
SOX3P41225 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SOX3P41225 Y_RNA.581-201ENST00000391017 97 ntBASIC1.44□□□□□ -2.18
SOX3P41225 Y_RNA.602-201ENST00000410535 92 ntBASIC1.44□□□□□ -2.18
SOX3P41225 RN7SKP200-201ENST00000410564 320 ntBASIC1.44□□□□□ -2.18
SOX3P41225 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.44□□□□□ -2.18
SOX3P41225 COX6CP10-201ENST00000416832 224 ntBASIC1.44□□□□□ -2.18
SOX3P41225 AC024067.1-201ENST00000426199 223 ntBASIC1.44□□□□□ -2.18
SOX3P41225 AL135790.2-201ENST00000437701 267 ntBASIC1.44□□□□□ -2.18
SOX3P41225 AL603825.1-201ENST00000438481 80 ntBASIC1.44□□□□□ -2.18
SOX3P41225 MIR4709-201ENST00000577272 72 ntBASIC1.44□□□□□ -2.18
SOX3P41225 DEFB117-201ENST00000602356 141 ntBASIC1.44□□□□□ -2.18
SOX3P41225 AL929325.1-201ENST00000603096 117 ntBASIC1.44□□□□□ -2.18
SOX3P41225 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SOX3P41225 Y_RNA.16-201ENST00000362421 102 ntBASIC1.43□□□□□ -2.18
SOX3P41225 RNU4-90P-201ENST00000362773 141 ntBASIC1.43□□□□□ -2.18
SOX3P41225 RNU6-238P-201ENST00000363313 106 ntBASIC1.43□□□□□ -2.18
SOX3P41225 RNU6-414P-201ENST00000363705 104 ntBASIC1.43□□□□□ -2.18
SOX3P41225 RNU6-574P-201ENST00000384265 107 ntBASIC1.43□□□□□ -2.18
SOX3P41225 RNU6-472P-201ENST00000384299 107 ntBASIC1.43□□□□□ -2.18
SOX3P41225 SNORD116-13-201ENST00000384408 92 ntBASIC1.43□□□□□ -2.18
SOX3P41225 Y_RNA.541-201ENST00000384640 113 ntBASIC1.43□□□□□ -2.18
SOX3P41225 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
SOX3P41225 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
SOX3P41225 MT-TW-201ENST00000387382 68 ntBASIC1.43□□□□□ -2.18
SOX3P41225 MIR1323-201ENST00000408090 73 ntBASIC1.43□□□□□ -2.18
SOX3P41225 RNU4-62P-201ENST00000410125 130 ntBASIC1.43□□□□□ -2.18
SOX3P41225 POLR2KP2-201ENST00000438155 177 ntBASIC1.43□□□□□ -2.18
SOX3P41225 JTBP1-201ENST00000441314 247 ntBASIC1.43□□□□□ -2.18
SOX3P41225 AL731563.1-201ENST00000442202 214 ntBASIC1.43□□□□□ -2.18
SOX3P41225 RNU6-1045P-201ENST00000516321 107 ntBASIC1.43□□□□□ -2.18
SOX3P41225 RNU6-635P-201ENST00000516651 102 ntBASIC1.43□□□□□ -2.18
SOX3P41225 SNORA44.1-201ENST00000517031 108 ntBASIC1.43□□□□□ -2.18
SOX3P41225 AL358944.1-201ENST00000528537 144 ntBASIC1.43□□□□□ -2.18
SOX3P41225 SNORA77B-201ENST00000578179 125 ntBASIC1.43□□□□□ -2.18
SOX3P41225 MIR3145-201ENST00000580727 82 ntBASIC1.43□□□□□ -2.18
SOX3P41225 AL645939.4-201ENST00000604495 135 ntBASIC1.43□□□□□ -2.18
SOX3P41225 Y_RNA.136-201ENST00000363444 102 ntBASIC1.42□□□□□ -2.18
SOX3P41225 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
SOX3P41225 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
SOX3P41225 Y_RNA.310-201ENST00000365063 113 ntBASIC1.42□□□□□ -2.18
SOX3P41225 Y_RNA.368-201ENST00000365547 113 ntBASIC1.42□□□□□ -2.18
SOX3P41225 Y_RNA.456-201ENST00000384232 111 ntBASIC1.42□□□□□ -2.18
SOX3P41225 RNU6-1031P-201ENST00000384773 107 ntBASIC1.42□□□□□ -2.18
SOX3P41225 MIR194-1-201ENST00000384892 85 ntBASIC1.42□□□□□ -2.18
SOX3P41225 MIR30A-201ENST00000385092 71 ntBASIC1.42□□□□□ -2.18
SOX3P41225 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.42□□□□□ -2.18
SOX3P41225 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
SOX3P41225 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.42□□□□□ -2.18
SOX3P41225 RPS20P10-201ENST00000451209 253 ntBASIC1.42□□□□□ -2.18
SOX3P41225 RNU6-1096P-201ENST00000517089 102 ntBASIC1.42□□□□□ -2.18
SOX3P41225 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.42□□□□□ -2.18
SOX3P41225 AP003733.2-201ENST00000529409 171 ntBASIC1.42□□□□□ -2.18
SOX3P41225 AC008269.2-201ENST00000561915 1105 ntBASIC1.42□□□□□ -2.18
SOX3P41225 AL162424.1-201ENST00000602325 221 ntBASIC1.42□□□□□ -2.18
SOX3P41225 AC004832.4-201ENST00000608952 331 ntBASIC1.42□□□□□ -2.18
SOX3P41225 AC095038.3-201ENST00000634439 195 ntBASIC1.42□□□□□ -2.18
SOX3P41225 WWP1P1-201ENST00000466609 2769 ntBASIC1.42□□□□□ -2.18
SOX3P41225 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SOX3P41225 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SOX3P41225 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SOX3P41225 Y_RNA.341-201ENST00000365341 102 ntBASIC1.41□□□□□ -2.18
SOX3P41225 Y_RNA.396-201ENST00000383949 103 ntBASIC1.41□□□□□ -2.18
SOX3P41225 Y_RNA.418-201ENST00000384029 102 ntBASIC1.41□□□□□ -2.18
SOX3P41225 RNU6-203P-201ENST00000384038 104 ntBASIC1.41□□□□□ -2.18
SOX3P41225 Y_RNA.483-201ENST00000384380 101 ntBASIC1.41□□□□□ -2.18
SOX3P41225 Y_RNA.569-201ENST00000384749 103 ntBASIC1.41□□□□□ -2.18
SOX3P41225 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
SOX3P41225 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
SOX3P41225 RNU6-855P-201ENST00000410395 104 ntBASIC1.41□□□□□ -2.18
SOX3P41225 RPS4XP11-201ENST00000446897 772 ntBASIC1.41□□□□□ -2.18
SOX3P41225 AC099513.1-201ENST00000490423 301 ntBASIC1.41□□□□□ -2.18
SOX3P41225 AC008834.1-201ENST00000511612 175 ntBASIC1.41□□□□□ -2.18
SOX3P41225 AP002004.2-201ENST00000531656 154 ntBASIC1.41□□□□□ -2.18
SOX3P41225 AC005972.2-201ENST00000604690 348 ntBASIC1.41□□□□□ -2.18
SOX3P41225 AC068700.1-201ENST00000565862 3754 ntBASIC1.41□□□□□ -2.18
SOX3P41225 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
SOX3P41225 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
SOX3P41225 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms