Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.14□□□□□ -1.91
PDE6BP35913 AC015712.3-201ENST00000559380 164 ntBASIC3.14□□□□□ -1.91
PDE6BP35913 AL021707.8-201ENST00000609428 183 ntBASIC3.14□□□□□ -1.91
PDE6BP35913 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDE6BP35913 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDE6BP35913 RNU6-978P-201ENST00000364371 103 ntBASIC3.13□□□□□ -1.91
PDE6BP35913 RNU6-1323P-201ENST00000384025 107 ntBASIC3.13□□□□□ -1.91
PDE6BP35913 RNU2-63P-201ENST00000410792 194 ntBASIC3.13□□□□□ -1.91
PDE6BP35913 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.13□□□□□ -1.91
PDE6BP35913 AC016925.1-201ENST00000458303 298 ntBASIC3.13□□□□□ -1.91
PDE6BP35913 RNU6-772P-201ENST00000516042 105 ntBASIC3.13□□□□□ -1.91
PDE6BP35913 SNORA27.1-201ENST00000362604 124 ntBASIC3.12□□□□□ -1.91
PDE6BP35913 RN7SKP101-201ENST00000411376 320 ntBASIC3.12□□□□□ -1.91
PDE6BP35913 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.12□□□□□ -1.91
PDE6BP35913 AC234781.5-201ENST00000508429 271 ntBASIC3.12□□□□□ -1.91
PDE6BP35913 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.12□□□□□ -1.91
PDE6BP35913 MIR378D2-201ENST00000580636 98 ntBASIC3.12□□□□□ -1.91
PDE6BP35913 MIR4679-1-201ENST00000637619 75 ntBASIC3.12□□□□□ -1.91
PDE6BP35913 AL159152.1-201ENST00000635019 2587 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.11□□□□□ -1.91
PDE6BP35913 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
PDE6BP35913 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDE6BP35913 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PDE6BP35913 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDE6BP35913 RNU6-484P-201ENST00000384016 107 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 Y_RNA.584-201ENST00000391090 114 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 MIR1289-2-201ENST00000408360 111 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 Y_RNA.630-201ENST00000411370 108 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 AL591806.2-201ENST00000433122 173 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 SNORA48.11-201ENST00000517015 89 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 RNA5SP170-201ENST00000517150 101 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 MIR1273D-201ENST00000577266 86 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 POLR3GP1-201ENST00000594073 261 ntBASIC3.11□□□□□ -1.91
PDE6BP35913 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PDE6BP35913 Z82209.1-201ENST00000422141 2135 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 U8.1-201ENST00000362843 134 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 RNU6-1255P-201ENST00000363434 112 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.1□□□□□ -1.91
PDE6BP35913 AC063976.4-201ENST00000421971 163 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 SNORD65B-201ENST00000459126 73 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 RPS26P55-201ENST00000471178 356 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 RPL36AP21-201ENST00000490372 323 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.1□□□□□ -1.91
PDE6BP35913 MTND5P34-201ENST00000568888 325 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 MIR4446-201ENST00000578505 67 ntBASIC3.1□□□□□ -1.91
PDE6BP35913 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.1□□□□□ -1.91
PDE6BP35913 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDE6BP35913 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDE6BP35913 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.09□□□□□ -1.91
PDE6BP35913 AL356292.1-201ENST00000283110 373 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 RNU6-674P-201ENST00000363831 107 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 SNORA22-201ENST00000383907 134 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 RNU6-147P-201ENST00000383983 107 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.09□□□□□ -1.91
PDE6BP35913 AL158147.1-201ENST00000443970 75 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 AC108210.2-201ENST00000503681 201 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.09□□□□□ -1.91
PDE6BP35913 RNU6-197P-201ENST00000516680 100 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 RNU2-60P-201ENST00000517290 128 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 AC108081.1-201ENST00000604358 221 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 RPL17P51-201ENST00000605218 238 ntBASIC3.09□□□□□ -1.91
PDE6BP35913 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDE6BP35913 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDE6BP35913 RNU6-1164P-201ENST00000364428 107 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 MIR29B2-201ENST00000385055 81 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 MIR764-201ENST00000390811 85 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 Y_RNA.587-201ENST00000391210 103 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 AC245047.4-201ENST00000433189 144 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 RNU6-437P-201ENST00000459408 95 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 SNORD33.1-201ENST00000516213 88 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 RNU6-63P-201ENST00000516690 95 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 MIR4679-2-201ENST00000578358 77 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 MIR3121-201ENST00000579680 77 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 AC005972.2-201ENST00000604690 348 ntBASIC3.08□□□□□ -1.92
PDE6BP35913 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
PDE6BP35913 SNORD14D-201ENST00000384390 87 ntBASIC3.07□□□□□ -1.92
PDE6BP35913 RNU6-482P-201ENST00000391068 107 ntBASIC3.07□□□□□ -1.92
PDE6BP35913 AL590004.2-201ENST00000404787 371 ntBASIC3.07□□□□□ -1.92
PDE6BP35913 MIR1283-1-201ENST00000408494 87 ntBASIC3.07□□□□□ -1.92
PDE6BP35913 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.07□□□□□ -1.92
PDE6BP35913 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PDE6BP35913 AL161788.1-201ENST00000441805 169 ntBASIC3.07□□□□□ -1.92
PDE6BP35913 RNU7-57P-201ENST00000459540 60 ntBASIC3.07□□□□□ -1.92
PDE6BP35913 MIR449C-201ENST00000516047 92 ntBASIC3.07□□□□□ -1.92
PDE6BP35913 AC090142.3-201ENST00000519012 385 ntBASIC3.07□□□□□ -1.92
PDE6BP35913 AC018630.3-201ENST00000542637 96 ntBASIC3.07□□□□□ -1.92
PDE6BP35913 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PDE6BP35913 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.06□□□□□ -1.92
PDE6BP35913 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PDE6BP35913 RNU1-72P-201ENST00000362976 153 ntBASIC3.06□□□□□ -1.92
PDE6BP35913 RNU6-508P-201ENST00000363231 103 ntBASIC3.06□□□□□ -1.92
PDE6BP35913 RNU6-117P-201ENST00000365415 107 ntBASIC3.06□□□□□ -1.92
PDE6BP35913 RNA5SP496-201ENST00000391240 109 ntBASIC3.06□□□□□ -1.92
PDE6BP35913 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.06□□□□□ -1.92
PDE6BP35913 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.06□□□□□ -1.92
PDE6BP35913 HMGN2P3-201ENST00000433603 273 ntBASIC3.06□□□□□ -1.92
PDE6BP35913 HMGN2P5-201ENST00000436882 273 ntBASIC3.06□□□□□ -1.92
PDE6BP35913 RPL39P40-201ENST00000445481 146 ntBASIC3.06□□□□□ -1.92
PDE6BP35913 RNU6-221P-201ENST00000459541 99 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms