Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNU6-138P-201ENST00000515952 107 ntBASIC1.9□□□□□ -2.11
KRT9P35527 RNU6-496P-201ENST00000516145 99 ntBASIC1.9□□□□□ -2.11
KRT9P35527 RNU4-71P-201ENST00000516258 113 ntBASIC1.9□□□□□ -2.11
KRT9P35527 AC018448.1-201ENST00000552843 316 ntBASIC1.9□□□□□ -2.11
KRT9P35527 AC037487.3-201ENST00000606668 112 ntBASIC1.9□□□□□ -2.11
KRT9P35527 SNORD113-5-201ENST00000607261 78 ntBASIC1.9□□□□□ -2.11
KRT9P35527 U6.73-201ENST00000619194 103 ntBASIC1.9□□□□□ -2.11
KRT9P35527 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.9□□□□□ -2.11
KRT9P35527 RNU6-626P-201ENST00000363354 107 ntBASIC1.89□□□□□ -2.11
KRT9P35527 RNU6-290P-201ENST00000365212 101 ntBASIC1.89□□□□□ -2.11
KRT9P35527 Y_RNA.539-201ENST00000384635 107 ntBASIC1.89□□□□□ -2.11
KRT9P35527 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
KRT9P35527 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.89□□□□□ -2.11
KRT9P35527 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRT9P35527 RNA5SP109-201ENST00000391010 116 ntBASIC1.89□□□□□ -2.11
KRT9P35527 MIR934-201ENST00000401241 83 ntBASIC1.89□□□□□ -2.11
KRT9P35527 AL603908.1-201ENST00000406098 201 ntBASIC1.89□□□□□ -2.11
KRT9P35527 RNU6-1186P-201ENST00000410429 97 ntBASIC1.89□□□□□ -2.11
KRT9P35527 RNA5SP247-201ENST00000411181 105 ntBASIC1.89□□□□□ -2.11
KRT9P35527 AC005002.2-201ENST00000438228 269 ntBASIC1.89□□□□□ -2.11
KRT9P35527 SUMO1P2-201ENST00000452524 304 ntBASIC1.89□□□□□ -2.11
KRT9P35527 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
KRT9P35527 RNU6-625P-201ENST00000459412 107 ntBASIC1.89□□□□□ -2.11
KRT9P35527 SERF1AP1-201ENST00000514575 187 ntBASIC1.89□□□□□ -2.11
KRT9P35527 SNORA40.9-201ENST00000515895 93 ntBASIC1.89□□□□□ -2.11
KRT9P35527 Y_RNA.700-201ENST00000516806 100 ntBASIC1.89□□□□□ -2.11
KRT9P35527 RNU7-110P-201ENST00000516891 62 ntBASIC1.89□□□□□ -2.11
KRT9P35527 RNU7-128P-201ENST00000517247 62 ntBASIC1.89□□□□□ -2.11
KRT9P35527 AC027419.1-201ENST00000522976 328 ntBASIC1.89□□□□□ -2.11
KRT9P35527 AC009779.6-201ENST00000603972 165 ntBASIC1.89□□□□□ -2.11
KRT9P35527 AC098479.1-201ENST00000609225 154 ntBASIC1.89□□□□□ -2.11
KRT9P35527 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRT9P35527 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRT9P35527 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRT9P35527 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.88□□□□□ -2.11
KRT9P35527 Y_RNA.338-201ENST00000365320 114 ntBASIC1.88□□□□□ -2.11
KRT9P35527 Y_RNA.785-201ENST00000384290 109 ntBASIC1.88□□□□□ -2.11
KRT9P35527 Y_RNA.498-201ENST00000384460 102 ntBASIC1.88□□□□□ -2.11
KRT9P35527 MIR548I3-201ENST00000408378 149 ntBASIC1.88□□□□□ -2.11
KRT9P35527 MIR548I1-201ENST00000408810 149 ntBASIC1.88□□□□□ -2.11
KRT9P35527 AL390729.2-201ENST00000416137 156 ntBASIC1.88□□□□□ -2.11
KRT9P35527 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.88□□□□□ -2.11
KRT9P35527 PIGPP3-201ENST00000425307 415 ntBASIC1.88□□□□□ -2.11
KRT9P35527 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.88□□□□□ -2.11
KRT9P35527 AL138752.1-201ENST00000452964 351 ntBASIC1.88□□□□□ -2.11
KRT9P35527 RPS26P45-201ENST00000471748 340 ntBASIC1.88□□□□□ -2.11
KRT9P35527 RNA5SP458-201ENST00000516188 119 ntBASIC1.88□□□□□ -2.11
KRT9P35527 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
KRT9P35527 SNORA81.3-201ENST00000517283 198 ntBASIC1.88□□□□□ -2.11
KRT9P35527 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.88□□□□□ -2.11
KRT9P35527 SNORA77B-201ENST00000578179 125 ntBASIC1.88□□□□□ -2.11
KRT9P35527 AC100821.1-201ENST00000523153 2479 ntBASIC1.88□□□□□ -2.11
KRT9P35527 Y_RNA.29-201ENST00000362570 113 ntBASIC1.87□□□□□ -2.11
KRT9P35527 Y_RNA.269-201ENST00000364685 89 ntBASIC1.87□□□□□ -2.11
KRT9P35527 RNU6-326P-201ENST00000365480 107 ntBASIC1.87□□□□□ -2.11
KRT9P35527 RNU6-20P-201ENST00000384106 107 ntBASIC1.87□□□□□ -2.11
KRT9P35527 RNU6-102P-201ENST00000384485 104 ntBASIC1.87□□□□□ -2.11
KRT9P35527 Y_RNA.569-201ENST00000384749 103 ntBASIC1.87□□□□□ -2.11
KRT9P35527 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
KRT9P35527 RNU6-482P-201ENST00000391068 107 ntBASIC1.87□□□□□ -2.11
KRT9P35527 SNORD58.1-201ENST00000391313 66 ntBASIC1.87□□□□□ -2.11
KRT9P35527 RNU4-30P-201ENST00000410245 143 ntBASIC1.87□□□□□ -2.11
KRT9P35527 RNU2-14P-201ENST00000411053 191 ntBASIC1.87□□□□□ -2.11
KRT9P35527 COX6CP10-201ENST00000416832 224 ntBASIC1.87□□□□□ -2.11
KRT9P35527 RAB28P5-201ENST00000427490 651 ntBASIC1.87□□□□□ -2.11
KRT9P35527 AL606517.2-201ENST00000442855 241 ntBASIC1.87□□□□□ -2.11
KRT9P35527 HSPE1P25-201ENST00000455484 251 ntBASIC1.87□□□□□ -2.11
KRT9P35527 snoU13.9-201ENST00000458927 103 ntBASIC1.87□□□□□ -2.11
KRT9P35527 AC010598.1-201ENST00000510378 103 ntBASIC1.87□□□□□ -2.11
KRT9P35527 RNU2-31P-201ENST00000516954 155 ntBASIC1.87□□□□□ -2.11
KRT9P35527 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.87□□□□□ -2.11
KRT9P35527 AC130289.1-201ENST00000577321 73 ntBASIC1.87□□□□□ -2.11
KRT9P35527 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.87□□□□□ -2.11
KRT9P35527 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.87□□□□□ -2.11
KRT9P35527 AC006435.5-201ENST00000624486 112 ntBASIC1.87□□□□□ -2.11
KRT9P35527 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRT9P35527 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.86□□□□□ -2.11
KRT9P35527 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
KRT9P35527 MIR410-201ENST00000362222 80 ntBASIC1.86□□□□□ -2.11
KRT9P35527 Y_RNA.200-201ENST00000364018 102 ntBASIC1.86□□□□□ -2.11
KRT9P35527 RNY1-201ENST00000364228 113 ntBASIC1.86□□□□□ -2.11
KRT9P35527 Y_RNA.230-201ENST00000364348 109 ntBASIC1.86□□□□□ -2.11
KRT9P35527 Y_RNA.297-201ENST00000364950 91 ntBASIC1.86□□□□□ -2.11
KRT9P35527 RPL23AP36-201ENST00000413895 458 ntBASIC1.86□□□□□ -2.11
KRT9P35527 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.86□□□□□ -2.11
KRT9P35527 MRPS10P1-201ENST00000448483 130 ntBASIC1.86□□□□□ -2.11
KRT9P35527 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.86□□□□□ -2.11
KRT9P35527 RPS27P22-201ENST00000478056 241 ntBASIC1.86□□□□□ -2.11
KRT9P35527 RNU7-99P-201ENST00000516271 62 ntBASIC1.86□□□□□ -2.11
KRT9P35527 AP002001.1-203ENST00000534002 267 ntBASIC1.86□□□□□ -2.11
KRT9P35527 CBX3P4-201ENST00000538909 354 ntBASIC1.86□□□□□ -2.11
KRT9P35527 MIR4709-201ENST00000577272 72 ntBASIC1.86□□□□□ -2.11
KRT9P35527 MIR4438-201ENST00000585271 93 ntBASIC1.86□□□□□ -2.11
KRT9P35527 AL365434.2-201ENST00000607979 234 ntBASIC1.86□□□□□ -2.11
KRT9P35527 U2.14-201ENST00000615943 113 ntBASIC1.86□□□□□ -2.11
KRT9P35527 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.86□□□□□ -2.11
KRT9P35527 AC095038.3-201ENST00000634439 195 ntBASIC1.86□□□□□ -2.11
KRT9P35527 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRT9P35527 Y_RNA.44-201ENST00000362676 108 ntBASIC1.85□□□□□ -2.11
KRT9P35527 Y_RNA.83-201ENST00000363005 113 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms