Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MIR5194-201ENST00000582634 120 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 MIR6766-201ENST00000622641 72 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.35□□□□□ -2.03
SLC6A4P31645 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SLC6A4P31645 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SLC6A4P31645 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SLC6A4P31645 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SLC6A4P31645 RNU1-58P-201ENST00000362413 163 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 RNU6-1164P-201ENST00000364428 107 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.34□□□□□ -2.03
SLC6A4P31645 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 SUMO1P4-201ENST00000429430 302 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 RNU6-437P-201ENST00000459408 95 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 RNU7-94P-201ENST00000459576 63 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 RNA5SP402-201ENST00000517148 110 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.34□□□□□ -2.03
SLC6A4P31645 MIR3169-201ENST00000578032 83 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 AC005786.1-201ENST00000588553 154 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 AL031274.2-201ENST00000599419 203 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 AL049779.4-201ENST00000604500 156 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 AL391903.3-201ENST00000612158 163 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
SLC6A4P31645 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SLC6A4P31645 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SLC6A4P31645 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
SLC6A4P31645 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
SLC6A4P31645 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SLC6A4P31645 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
SLC6A4P31645 MIR616-201ENST00000385293 97 ntBASIC2.33□□□□□ -2.04
SLC6A4P31645 PCNPP3-201ENST00000393579 471 ntBASIC2.33□□□□□ -2.04
SLC6A4P31645 AL512604.1-201ENST00000404812 257 ntBASIC2.33□□□□□ -2.04
SLC6A4P31645 RNU6-1186P-201ENST00000410429 97 ntBASIC2.33□□□□□ -2.04
SLC6A4P31645 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC6A4P31645 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC6A4P31645 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC6A4P31645 MIR1273D-201ENST00000577266 86 ntBASIC2.33□□□□□ -2.04
SLC6A4P31645 MIR2681-201ENST00000581814 105 ntBASIC2.33□□□□□ -2.04
SLC6A4P31645 Y_RNA.75-201ENST00000362927 97 ntBASIC2.32□□□□□ -2.04
SLC6A4P31645 RNU6-312P-201ENST00000364629 107 ntBASIC2.32□□□□□ -2.04
SLC6A4P31645 RNU1-138P-201ENST00000384093 164 ntBASIC2.32□□□□□ -2.04
SLC6A4P31645 RNU1-52P-201ENST00000384190 164 ntBASIC2.32□□□□□ -2.04
SLC6A4P31645 RNA5SP323-201ENST00000391094 133 ntBASIC2.32□□□□□ -2.04
SLC6A4P31645 RNA5SP496-201ENST00000391240 109 ntBASIC2.32□□□□□ -2.04
SLC6A4P31645 AL117342.1-201ENST00000404861 406 ntBASIC2.32□□□□□ -2.04
SLC6A4P31645 MIR4744-201ENST00000581563 82 ntBASIC2.32□□□□□ -2.04
SLC6A4P31645 AC073413.2-201ENST00000604332 360 ntBASIC2.32□□□□□ -2.04
SLC6A4P31645 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC6A4P31645 Y_RNA.24-201ENST00000362508 103 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 RNU6-969P-201ENST00000383900 105 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 RNY3P5-201ENST00000384127 102 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 AL603908.1-201ENST00000406098 201 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 AL591806.2-201ENST00000433122 173 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 RPS4XP11-201ENST00000446897 772 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC6A4P31645 AC005840.1-201ENST00000498412 377 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 RNU1-104P-201ENST00000517280 175 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 AC022559.1-201ENST00000520905 205 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 AL358944.1-201ENST00000528537 144 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 MRPS18CP4-201ENST00000535821 231 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC6A4P31645 AC018630.2-201ENST00000534866 2403 ntBASIC2.31□□□□□ -2.04
SLC6A4P31645 AC100821.1-201ENST00000523153 2479 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SLC6A4P31645 Y_RNA.23-201ENST00000362496 106 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 SNORD115-3-201ENST00000363100 82 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 RNA5SP465-201ENST00000391195 109 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 RNU2-2P-201ENST00000410396 191 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 RPS26P45-201ENST00000471748 340 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 Y_RNA.797-201ENST00000515977 94 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 RNU6-1212P-201ENST00000517023 104 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 RNU6-1096P-201ENST00000517089 102 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 RNU7-128P-201ENST00000517247 62 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 RNU2-4P-201ENST00000606190 192 ntBASIC2.3□□□□□ -2.04
SLC6A4P31645 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC6A4P31645 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC6A4P31645 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SLC6A4P31645 AC068700.1-201ENST00000565862 3754 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 AC092881.1-201ENST00000638218 2733 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 Y_RNA.182-201ENST00000363880 111 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 RNU4-10P-201ENST00000364383 140 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 SNORA67.1-201ENST00000364749 141 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 RNU6-275P-201ENST00000364910 107 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 SNORA8-201ENST00000384574 139 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 RNU6-136P-201ENST00000384663 107 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 RNU6-1228P-201ENST00000391014 107 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 RNA5SP467-201ENST00000391274 118 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC6A4P31645 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A4P31645 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC6A4P31645 RNU6-1219P-201ENST00000516143 112 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 RNU6-341P-201ENST00000516973 96 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 AC011604.1-201ENST00000545978 196 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC6A4P31645 SNORD14A-201ENST00000606526 91 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 AL137847.3-201ENST00000611521 109 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 MIR6079-201ENST00000635807 62 ntBASIC2.29□□□□□ -2.04
SLC6A4P31645 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A4P31645 SNORD114-1-201ENST00000362705 72 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms