Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 MIR4788-201ENST00000639104 80 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 RNU6-282P-201ENST00000365357 103 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 RNU6-541P-201ENST00000384709 110 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 MIR873-201ENST00000401120 77 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 RNU6-855P-201ENST00000410395 104 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 RNU2-29P-201ENST00000410423 189 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 MIR18B-201ENST00000454574 71 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.7□□□□□ -2.52
SDC4P31431 MIR548AB-201ENST00000584917 84 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 AC006566.1-201ENST00000608943 513 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 HULC.1-201ENST00000612720 240 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 MIR8064-201ENST00000612863 90 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 AC072046.2-201ENST00000618366 268 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 MIR6514-201ENST00000622549 70 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 AC007671.2-201ENST00000637344 619 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 AC006927.3-201ENST00000638789 384 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 AC091304.10-201ENST00000641554 121 ntBASIC-0.7□□□□□ -2.52
SDC4P31431 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 SNORD115-32-201ENST00000364079 82 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 SNORD49B-201ENST00000365172 72 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 MIR518F-201ENST00000384973 87 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 MIR153-2-201ENST00000385225 87 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 RNU2-9P-201ENST00000410194 145 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 Z99497.1-201ENST00000421282 135 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.71□□□□□ -2.52
SDC4P31431 POLR2KP2-201ENST00000438155 177 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 HMGN2P32-201ENST00000444648 269 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 AC116353.2-201ENST00000505332 712 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 AC026782.1-201ENST00000512952 449 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 SNORA31.14-201ENST00000516728 116 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 RNU2-60P-201ENST00000517290 128 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 AL157687.1-201ENST00000554853 619 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 AC121247.2-201ENST00000604776 136 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 AL021368.1-201ENST00000607490 540 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 AL157392.4-201ENST00000609756 345 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 AP000240.1-201ENST00000609910 452 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 MIR8066-201ENST00000617280 78 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.71□□□□□ -2.52
SDC4P31431 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.71□□□□□ -2.52
SDC4P31431 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
SDC4P31431 RNU6-284P-201ENST00000411105 106 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 ELOCP21-201ENST00000412558 336 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 AC009961.2-201ENST00000435771 251 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 RNU7-180P-201ENST00000459240 63 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 MIR3684-201ENST00000579779 74 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 MIR548AD-201ENST00000584780 82 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 MIR548AZ-201ENST00000616567 95 ntBASIC-0.72□□□□□ -2.52
SDC4P31431 SNORD114-11-201ENST00000363738 75 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 RNU6-280P-201ENST00000364145 104 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 RNU6-454P-201ENST00000364292 107 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 RNU6-480P-201ENST00000384332 107 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 SNORD28-201ENST00000384706 75 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 MIR588-201ENST00000384900 83 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 RNU6-131P-201ENST00000391144 107 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 AL008987.1-201ENST00000415528 237 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 MTCYBP8-201ENST00000422855 651 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.73□□□□□ -2.53
SDC4P31431 RNU2-13P-201ENST00000515909 113 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 AC005828.6-201ENST00000606610 232 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 SNORA70.25-201ENST00000612741 95 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 AC240442.1-201ENST00000616055 283 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 Pinc.1-201ENST00000616452 154 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 FTX_2.1-201ENST00000618816 94 ntBASIC-0.73□□□□□ -2.53
SDC4P31431 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.73□□□□□ -2.53
SDC4P31431 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 RNU6-740P-201ENST00000364734 105 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 RNU6-456P-201ENST00000384493 107 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 RPL21P38-201ENST00000418090 167 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 AC114755.3-201ENST00000481111 251 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 AC105029.1-201ENST00000520250 669 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 PIGPP4-201ENST00000584447 307 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 AL121757.2-201ENST00000611223 313 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 AC022306.2-201ENST00000617563 647 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 uc_338.36-201ENST00000622331 158 ntBASIC-0.74□□□□□ -2.53
SDC4P31431 RNU6-500P-201ENST00000362349 107 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 HMGN2P22-201ENST00000427588 175 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 SNRPGP14-201ENST00000435400 219 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 MTCO2P16-201ENST00000436962 677 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 MTATP6P26-201ENST00000445926 662 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 MTATP6P14-201ENST00000455189 673 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 MIR5692C1-201ENST00000585309 91 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 AC244669.1-204ENST00000621564 178 ntBASIC-0.75□□□□□ -2.53
SDC4P31431 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms