Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 Y_RNA.8-201ENST00000362353 102 ntBASIC2.58□□□□□ -2
VAMP1P23763 RNA5SP50-201ENST00000363731 107 ntBASIC2.58□□□□□ -2
VAMP1P23763 Y_RNA.180-201ENST00000363867 113 ntBASIC2.58□□□□□ -2
VAMP1P23763 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
VAMP1P23763 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
VAMP1P23763 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
VAMP1P23763 RNU6-504P-201ENST00000516568 104 ntBASIC2.58□□□□□ -2
VAMP1P23763 SNORA44.1-201ENST00000517031 108 ntBASIC2.58□□□□□ -2
VAMP1P23763 MIR4778-201ENST00000577635 80 ntBASIC2.58□□□□□ -2
VAMP1P23763 MIR5004-201ENST00000579078 107 ntBASIC2.58□□□□□ -2
VAMP1P23763 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.58□□□□□ -2
VAMP1P23763 AL162274.2-201ENST00000614406 332 ntBASIC2.58□□□□□ -2
VAMP1P23763 ZYXP1-201ENST00000617638 118 ntBASIC2.58□□□□□ -2
VAMP1P23763 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.58□□□□□ -2
VAMP1P23763 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.57□□□□□ -2
VAMP1P23763 RNU6-661P-201ENST00000362409 107 ntBASIC2.57□□□□□ -2
VAMP1P23763 Y_RNA.337-201ENST00000365312 102 ntBASIC2.57□□□□□ -2
VAMP1P23763 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VAMP1P23763 MIR660-201ENST00000385235 97 ntBASIC2.57□□□□□ -2
VAMP1P23763 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.57□□□□□ -2
VAMP1P23763 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.57□□□□□ -2
VAMP1P23763 RN7SKP192-201ENST00000411291 327 ntBASIC2.57□□□□□ -2
VAMP1P23763 AC074050.1-201ENST00000563247 211 ntBASIC2.57□□□□□ -2
VAMP1P23763 DEFB122-202ENST00000569013 197 ntBASIC2.57□□□□□ -2
VAMP1P23763 MIR3160-1-201ENST00000577972 85 ntBASIC2.57□□□□□ -2
VAMP1P23763 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
VAMP1P23763 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
VAMP1P23763 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
VAMP1P23763 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
VAMP1P23763 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VAMP1P23763 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
VAMP1P23763 AL365361.1-201ENST00000566942 3481 ntBASIC2.56□□□□□ -2
VAMP1P23763 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
VAMP1P23763 MIR424-201ENST00000362227 98 ntBASIC2.56□□□□□ -2
VAMP1P23763 RNU6-1123P-201ENST00000362347 106 ntBASIC2.56□□□□□ -2
VAMP1P23763 RNU6-833P-201ENST00000363486 107 ntBASIC2.56□□□□□ -2
VAMP1P23763 RNU6-439P-201ENST00000384188 106 ntBASIC2.56□□□□□ -2
VAMP1P23763 Y_RNA.486-201ENST00000384398 107 ntBASIC2.56□□□□□ -2
VAMP1P23763 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.56□□□□□ -2
VAMP1P23763 SNORD116-25-201ENST00000516517 92 ntBASIC2.56□□□□□ -2
VAMP1P23763 AC121758.2-201ENST00000553271 193 ntBASIC2.56□□□□□ -2
VAMP1P23763 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.56□□□□□ -2
VAMP1P23763 AL627230.6-201ENST00000611129 280 ntBASIC2.56□□□□□ -2
VAMP1P23763 MIR8074-201ENST00000615081 81 ntBASIC2.56□□□□□ -2
VAMP1P23763 Y_RNA.272-201ENST00000364696 102 ntBASIC2.55□□□□□ -2
VAMP1P23763 Y_RNA.634-201ENST00000364811 113 ntBASIC2.55□□□□□ -2
VAMP1P23763 MIR452-201ENST00000385020 85 ntBASIC2.55□□□□□ -2
VAMP1P23763 MIR676-201ENST00000390702 67 ntBASIC2.55□□□□□ -2
VAMP1P23763 RNU6-239P-201ENST00000390990 99 ntBASIC2.55□□□□□ -2
VAMP1P23763 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
VAMP1P23763 SNORD37.2-201ENST00000391075 66 ntBASIC2.55□□□□□ -2
VAMP1P23763 MIR1193-201ENST00000408109 78 ntBASIC2.55□□□□□ -2
VAMP1P23763 RNU4-43P-201ENST00000410628 137 ntBASIC2.55□□□□□ -2
VAMP1P23763 RN7SKP27-201ENST00000410684 333 ntBASIC2.55□□□□□ -2
VAMP1P23763 AC004975.1-201ENST00000428733 208 ntBASIC2.55□□□□□ -2
VAMP1P23763 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.55□□□□□ -2
VAMP1P23763 JTBP1-201ENST00000441314 247 ntBASIC2.55□□□□□ -2
VAMP1P23763 AC093850.1-201ENST00000454121 251 ntBASIC2.55□□□□□ -2
VAMP1P23763 RNA5SP233-201ENST00000459153 113 ntBASIC2.55□□□□□ -2
VAMP1P23763 MIR2682-201ENST00000580305 110 ntBASIC2.55□□□□□ -2
VAMP1P23763 MIR378D2-201ENST00000580636 98 ntBASIC2.55□□□□□ -2
VAMP1P23763 VN1R85P-201ENST00000601587 426 ntBASIC2.55□□□□□ -2
VAMP1P23763 MIR6840-201ENST00000611937 71 ntBASIC2.55□□□□□ -2
VAMP1P23763 MIR6758-201ENST00000620653 63 ntBASIC2.55□□□□□ -2
VAMP1P23763 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.55□□□□□ -2
VAMP1P23763 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VAMP1P23763 AL596028.1-201ENST00000326971 197 ntBASIC2.54□□□□□ -2
VAMP1P23763 RNA5SP259-201ENST00000365541 109 ntBASIC2.54□□□□□ -2
VAMP1P23763 RNU6-484P-201ENST00000384016 107 ntBASIC2.54□□□□□ -2
VAMP1P23763 MIR181B1-201ENST00000385240 110 ntBASIC2.54□□□□□ -2
VAMP1P23763 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.54□□□□□ -2
VAMP1P23763 RPS27P21-201ENST00000486977 252 ntBASIC2.54□□□□□ -2
VAMP1P23763 AC015726.2-201ENST00000620112 122 ntBASIC2.54□□□□□ -2
VAMP1P23763 AC068724.3-201ENST00000625906 87 ntBASIC2.54□□□□□ -2
VAMP1P23763 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.53□□□□□ -2
VAMP1P23763 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
VAMP1P23763 MIRLET7C-201ENST00000362160 84 ntBASIC2.53□□□□□ -2
VAMP1P23763 RNU6-199P-201ENST00000362954 107 ntBASIC2.53□□□□□ -2
VAMP1P23763 Y_RNA.91-201ENST00000363042 107 ntBASIC2.53□□□□□ -2
VAMP1P23763 RNU4-84P-201ENST00000364200 139 ntBASIC2.53□□□□□ -2
VAMP1P23763 MIR144-201ENST00000384886 86 ntBASIC2.53□□□□□ -2
VAMP1P23763 MIR548I3-201ENST00000408378 149 ntBASIC2.53□□□□□ -2
VAMP1P23763 MIR548I1-201ENST00000408810 149 ntBASIC2.53□□□□□ -2
VAMP1P23763 SNRPGP13-201ENST00000442212 177 ntBASIC2.53□□□□□ -2
VAMP1P23763 AC099513.1-201ENST00000490423 301 ntBASIC2.53□□□□□ -2
VAMP1P23763 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.53□□□□□ -2
VAMP1P23763 ZNF861P-201ENST00000588126 639 ntBASIC2.53□□□□□ -2
VAMP1P23763 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.53□□□□□ -2
VAMP1P23763 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.53□□□□□ -2.01
VAMP1P23763 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2.01
VAMP1P23763 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VAMP1P23763 RNU6-449P-201ENST00000383914 107 ntBASIC2.52□□□□□ -2.01
VAMP1P23763 SNORD116-18-201ENST00000383961 92 ntBASIC2.52□□□□□ -2.01
VAMP1P23763 Y_RNA.464-201ENST00000384282 110 ntBASIC2.52□□□□□ -2.01
VAMP1P23763 AC096725.1-201ENST00000514266 313 ntBASIC2.52□□□□□ -2.01
VAMP1P23763 RNU6-693P-201ENST00000516134 107 ntBASIC2.52□□□□□ -2.01
VAMP1P23763 Y_RNA.666-201ENST00000516187 112 ntBASIC2.52□□□□□ -2.01
VAMP1P23763 RNU6-1270P-201ENST00000517128 108 ntBASIC2.52□□□□□ -2.01
VAMP1P23763 IGLV3-17-201ENST00000519099 244 ntBASIC2.52□□□□□ -2.01
VAMP1P23763 SUMO2P16-201ENST00000519475 264 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms