Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RNU6-75P-201ENST00000515944 104 ntBASIC4.45□□□□□ -1.7
CD44P16070 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CD44P16070 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CD44P16070 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CD44P16070 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CD44P16070 SNORA31-201ENST00000362607 130 ntBASIC4.44□□□□□ -1.7
CD44P16070 CST2P1-201ENST00000425770 87 ntBASIC4.44□□□□□ -1.7
CD44P16070 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.44□□□□□ -1.7
CD44P16070 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC4.44□□□□□ -1.7
CD44P16070 RN7SL604P-201ENST00000492589 296 ntBASIC4.44□□□□□ -1.7
CD44P16070 CYCSP29-201ENST00000533731 318 ntBASIC4.44□□□□□ -1.7
CD44P16070 AL360157.1-201ENST00000565962 87 ntBASIC4.44□□□□□ -1.7
CD44P16070 AL356280.1-201ENST00000603614 379 ntBASIC4.44□□□□□ -1.7
CD44P16070 PLD1-217ENST00000627725 174 ntTSL 5 BASIC4.44□□□□□ -1.7
CD44P16070 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CD44P16070 RNA5SP322-201ENST00000363617 119 ntBASIC4.43□□□□□ -1.7
CD44P16070 RNA5SP399-201ENST00000364003 117 ntBASIC4.43□□□□□ -1.7
CD44P16070 ATP5J2P3-201ENST00000451550 258 ntBASIC4.43□□□□□ -1.7
CD44P16070 RNU6-850P-201ENST00000516934 103 ntBASIC4.43□□□□□ -1.7
CD44P16070 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC4.43□□□□□ -1.7
CD44P16070 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC4.43□□□□□ -1.7
CD44P16070 AL357312.1-201ENST00000603879 298 ntBASIC4.43□□□□□ -1.7
CD44P16070 MIR6868-201ENST00000611215 58 ntBASIC4.43□□□□□ -1.7
CD44P16070 MIR8053-201ENST00000613344 75 ntBASIC4.43□□□□□ -1.7
CD44P16070 AC022149.2-201ENST00000621061 203 ntBASIC4.43□□□□□ -1.7
CD44P16070 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
CD44P16070 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD44P16070 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
CD44P16070 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.42□□□□□ -1.7
CD44P16070 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
CD44P16070 RNU6-1216P-201ENST00000362590 107 ntBASIC4.42□□□□□ -1.7
CD44P16070 RNA5SP117-201ENST00000365294 118 ntBASIC4.42□□□□□ -1.7
CD44P16070 Y_RNA.354-201ENST00000365448 111 ntBASIC4.42□□□□□ -1.7
CD44P16070 snoU13.17-201ENST00000458802 104 ntBASIC4.42□□□□□ -1.7
CD44P16070 AC026726.1-201ENST00000512859 601 ntBASIC4.42□□□□□ -1.7
CD44P16070 AC090897.1-201ENST00000580909 226 ntBASIC4.42□□□□□ -1.7
CD44P16070 MIR3675-201ENST00000583661 73 ntBASIC4.42□□□□□ -1.7
CD44P16070 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD44P16070 MIR8055-201ENST00000610739 97 ntBASIC4.42□□□□□ -1.7
CD44P16070 MIR8059-201ENST00000620427 81 ntBASIC4.42□□□□□ -1.7
CD44P16070 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD44P16070 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD44P16070 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CD44P16070 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD44P16070 RNU6-936P-201ENST00000384005 107 ntBASIC4.41□□□□□ -1.7
CD44P16070 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC4.41□□□□□ -1.7
CD44P16070 AC083863.1-201ENST00000438811 231 ntBASIC4.41□□□□□ -1.7
CD44P16070 RPS23P1-201ENST00000491662 432 ntBASIC4.41□□□□□ -1.7
CD44P16070 RNU1-61P-201ENST00000516107 151 ntBASIC4.41□□□□□ -1.7
CD44P16070 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.41□□□□□ -1.7
CD44P16070 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.41□□□□□ -1.7
CD44P16070 AC133485.1-201ENST00000567176 124 ntBASIC4.41□□□□□ -1.7
CD44P16070 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CD44P16070 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD44P16070 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CD44P16070 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD44P16070 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD44P16070 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD44P16070 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CD44P16070 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CD44P16070 RNU6-1079P-201ENST00000362861 110 ntBASIC4.4□□□□□ -1.71
CD44P16070 SNORD115-3-201ENST00000363100 82 ntBASIC4.4□□□□□ -1.71
CD44P16070 RNU6-340P-201ENST00000364005 107 ntBASIC4.4□□□□□ -1.71
CD44P16070 SNORD115-22-201ENST00000364456 82 ntBASIC4.4□□□□□ -1.71
CD44P16070 RNU6-1184P-201ENST00000384588 108 ntBASIC4.4□□□□□ -1.71
CD44P16070 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CD44P16070 RN7SL636P-201ENST00000497504 294 ntBASIC4.4□□□□□ -1.71
CD44P16070 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.4□□□□□ -1.71
CD44P16070 SNORD92-201ENST00000585078 85 ntBASIC4.4□□□□□ -1.71
CD44P16070 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.4□□□□□ -1.71
CD44P16070 AC069114.2-201ENST00000604699 304 ntBASIC4.4□□□□□ -1.71
CD44P16070 SNORD14A-201ENST00000606526 91 ntBASIC4.4□□□□□ -1.71
CD44P16070 AC002076.2-201ENST00000617362 122 ntBASIC4.4□□□□□ -1.71
CD44P16070 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD44P16070 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD44P16070 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.39□□□□□ -1.71
CD44P16070 IPO8P1-201ENST00000455509 3109 ntBASIC4.39□□□□□ -1.71
CD44P16070 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD44P16070 SNORA60-201ENST00000362396 134 ntBASIC4.39□□□□□ -1.71
CD44P16070 RNU6-833P-201ENST00000363486 107 ntBASIC4.39□□□□□ -1.71
CD44P16070 Y_RNA.283-201ENST00000364798 112 ntBASIC4.39□□□□□ -1.71
CD44P16070 MIR516B2-201ENST00000385190 85 ntBASIC4.39□□□□□ -1.71
CD44P16070 SNORA40.6-201ENST00000391153 128 ntBASIC4.39□□□□□ -1.71
CD44P16070 RPL18P10-201ENST00000425606 538 ntBASIC4.39□□□□□ -1.71
CD44P16070 AL691482.2-201ENST00000457453 84 ntBASIC4.39□□□□□ -1.71
CD44P16070 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.39□□□□□ -1.71
CD44P16070 AC018868.1-201ENST00000491307 315 ntBASIC4.39□□□□□ -1.71
CD44P16070 YPEL5P3-201ENST00000547227 352 ntBASIC4.39□□□□□ -1.71
CD44P16070 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD44P16070 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD44P16070 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CD44P16070 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD44P16070 RNY1P2-201ENST00000364820 117 ntBASIC4.38□□□□□ -1.71
CD44P16070 RNY1P13-201ENST00000365030 105 ntBASIC4.38□□□□□ -1.71
CD44P16070 RNU6-1083P-201ENST00000384022 107 ntBASIC4.38□□□□□ -1.71
CD44P16070 MIR1251-201ENST00000408552 70 ntBASIC4.38□□□□□ -1.71
CD44P16070 SNORA31.21-201ENST00000517180 77 ntBASIC4.38□□□□□ -1.71
CD44P16070 AC005000.2-201ENST00000605468 310 ntBASIC4.38□□□□□ -1.71
CD44P16070 SNORA28-201ENST00000606769 126 ntBASIC4.38□□□□□ -1.71
CD44P16070 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms