Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC018448.1-201ENST00000552843 316 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.68□□□□□ -2.3
COL11A1P12107 VN1R91P-201ENST00000594377 169 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.68□□□□□ -2.3
COL11A1P12107 AL357075.2-201ENST00000614906 189 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AC240442.1-201ENST00000616055 283 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AC243829.3-201ENST00000622177 108 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AC027335.2-201ENST00000624030 375 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 MTND4LP32-201ENST00000636111 270 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 SNORD42.2-201ENST00000365570 69 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 Y_RNA.384-201ENST00000383909 102 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 Y_RNA.445-201ENST00000384168 102 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 Y_RNA.463-201ENST00000384271 102 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 MIR520A-201ENST00000384862 85 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AL117342.1-201ENST00000404861 406 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AL355796.1-201ENST00000406706 323 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RNA5SP504-201ENST00000410676 117 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 MRPS18CP6-201ENST00000423587 223 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AC245047.4-201ENST00000433189 144 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RPL30P15-201ENST00000457129 321 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AP000870.1-201ENST00000472927 406 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RPS27P22-201ENST00000478056 241 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RNA5SP20-201ENST00000515976 84 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RNU6-496P-201ENST00000516145 99 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AL080274.1-201ENST00000605565 220 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AL365434.2-201ENST00000607979 234 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AL138825.1-201ENST00000618587 192 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 uc_338.22-201ENST00000622722 187 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.68□□□□□ -2.3
COL11A1P12107 MTND4P29-201ENST00000503122 1372 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 AC010615.1-201ENST00000594254 1764 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 RNU6-222P-201ENST00000362438 107 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 Y_RNA.106-201ENST00000363189 100 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 Y_RNA.263-201ENST00000364659 114 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 RNU6-407P-201ENST00000365280 104 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 MIR891A-201ENST00000401237 79 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 RNU2-54P-201ENST00000410299 190 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 RNU6-1001P-201ENST00000411265 100 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.67□□□□□ -2.3
COL11A1P12107 U8.20-201ENST00000459445 131 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 SNORA40.9-201ENST00000515895 93 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 RNU6-436P-201ENST00000516171 114 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.67□□□□□ -2.3
COL11A1P12107 AL162424.1-201ENST00000602325 221 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 C8orf59P2-201ENST00000603441 271 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 AC022441.3-201ENST00000605737 136 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 U6.73-201ENST00000619194 103 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 MIR8054-201ENST00000620877 86 ntBASIC0.67□□□□□ -2.3
COL11A1P12107 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.67□□□□□ -2.3
COL11A1P12107 MIR369-201ENST00000362155 70 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 U3.8-201ENST00000363675 217 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 Y_RNA.243-201ENST00000364481 109 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 RNU6-1310P-201ENST00000384153 107 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 RNU6-310P-201ENST00000384655 107 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 AC018865.2-201ENST00000423631 129 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 AC092423.1-201ENST00000430165 186 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 TOMM22P2-201ENST00000430735 237 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 Z98949.2-201ENST00000440996 144 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 RNU6-625P-201ENST00000459412 107 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 SNORA25.10-201ENST00000515926 124 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 RNU1-117P-201ENST00000517041 158 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 MIR5701-3-201ENST00000578890 82 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 MIR4795-201ENST00000584182 89 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 MIR5701-1-201ENST00000585138 82 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 AC005828.6-201ENST00000606610 232 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 AL359075.3-201ENST00000613288 217 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 MIR5701-2-201ENST00000615634 82 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.66□□□□□ -2.3
COL11A1P12107 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.66□□□□□ -2.3
COL11A1P12107 AC006001.4-201ENST00000622243 395 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.66□□□□□ -2.3
COL11A1P12107 U6.115-201ENST00000636045 103 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 U6.108-201ENST00000637764 58 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 MIR1302-1-201ENST00000637932 143 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
COL11A1P12107 AC005592.1-201ENST00000566527 1640 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 Y_RNA.61-201ENST00000362835 102 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 Y_RNA.252-201ENST00000364556 101 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 Y_RNA.361-201ENST00000365515 120 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 Y_RNA.419-201ENST00000384041 102 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 Y_RNA.518-201ENST00000384552 113 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 MIR515-2-201ENST00000384883 83 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 MIR515-1-201ENST00000384884 83 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 Y_RNA.645-201ENST00000391229 102 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 SNORA75.6-201ENST00000391318 127 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 RNU6-101P-201ENST00000410323 104 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 COX6CP10-201ENST00000416832 224 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 AC010154.1-201ENST00000425857 269 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 AL049830.1-201ENST00000468034 425 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 RNA5SP437-201ENST00000517249 129 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 SUMO2P16-201ENST00000519475 264 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 AC023157.2-201ENST00000540596 141 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 AL133255.1-201ENST00000606374 441 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.66□□□□□ -2.3
COL11A1P12107 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
COL11A1P12107 Y_RNA.5-201ENST00000362334 102 ntBASIC0.65□□□□□ -2.31
COL11A1P12107 RNU6-626P-201ENST00000363354 107 ntBASIC0.65□□□□□ -2.31
COL11A1P12107 Y_RNA.813-201ENST00000364639 102 ntBASIC0.65□□□□□ -2.31
COL11A1P12107 RNU1-36P-201ENST00000365130 165 ntBASIC0.65□□□□□ -2.31
COL11A1P12107 RNU6-890P-201ENST00000384121 107 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms