Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 Y_RNA.238-201ENST00000364441 102 ntBASIC2.5□□□□□ -2.01
SNRPA1P09661 Y_RNA.464-201ENST00000384282 110 ntBASIC2.5□□□□□ -2.01
SNRPA1P09661 RNU6-136P-201ENST00000384663 107 ntBASIC2.5□□□□□ -2.01
SNRPA1P09661 RNU6-381P-201ENST00000391259 108 ntBASIC2.5□□□□□ -2.01
SNRPA1P09661 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.5□□□□□ -2.01
SNRPA1P09661 MRPS18CP4-201ENST00000535821 231 ntBASIC2.5□□□□□ -2.01
SNRPA1P09661 MIR4438-201ENST00000585271 93 ntBASIC2.5□□□□□ -2.01
SNRPA1P09661 MIR548AY-201ENST00000617669 107 ntBASIC2.5□□□□□ -2.01
SNRPA1P09661 AC006435.5-201ENST00000624486 112 ntBASIC2.5□□□□□ -2.01
SNRPA1P09661 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SNRPA1P09661 snoU2_19.4-201ENST00000364329 80 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 SNORA8.3-201ENST00000384679 139 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 MIR548M-201ENST00000408260 86 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 MIR1253-201ENST00000408273 105 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 MIR1262-201ENST00000408276 93 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 RNA5SP511-201ENST00000410487 115 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.49□□□□□ -2.01
SNRPA1P09661 HMGN2P34-201ENST00000437647 269 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.49□□□□□ -2.01
SNRPA1P09661 RNU7-115P-201ENST00000516433 55 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 AL137100.2-201ENST00000555786 315 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.49□□□□□ -2.01
SNRPA1P09661 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 AC104465.1-201ENST00000611365 139 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 Y_RNA.802-201ENST00000614892 130 ntBASIC2.49□□□□□ -2.01
SNRPA1P09661 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNRPA1P09661 CENPCP1-201ENST00000533085 2578 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SNRPA1P09661 Y_RNA.182-201ENST00000363880 111 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 RNU6-117P-201ENST00000365415 107 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.48□□□□□ -2.01
SNRPA1P09661 RNU6-969P-201ENST00000383900 105 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 MIR626-201ENST00000385032 94 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 RNU6-383P-201ENST00000410864 94 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 SRIP3-201ENST00000413200 219 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.48□□□□□ -2.01
SNRPA1P09661 AC097462.1-201ENST00000514125 324 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 RNU6-1278P-201ENST00000516130 107 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 NDUFA5P6-201ENST00000542110 379 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 POLR3GP1-201ENST00000594073 261 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 AC005972.2-201ENST00000604690 348 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 U4atac.1-201ENST00000618345 95 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 AC021753.1-201ENST00000635724 168 ntBASIC2.48□□□□□ -2.01
SNRPA1P09661 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNRPA1P09661 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNRPA1P09661 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNRPA1P09661 RNU1-22P-201ENST00000363334 158 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 SNORD114-6-201ENST00000364393 72 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 Y_RNA.412-201ENST00000384001 104 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 RNU6-417P-201ENST00000384712 107 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 SNORA36B-201ENST00000410438 131 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 RNU5E-9P-201ENST00000411164 104 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 AL445685.2-201ENST00000422551 342 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 AC011406.1-201ENST00000512440 370 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 RNU6-1041P-201ENST00000516254 102 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 AC015720.1-201ENST00000565251 277 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 AP003357.1-201ENST00000604497 148 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 SNORD14A-201ENST00000606526 91 ntBASIC2.47□□□□□ -2.01
SNRPA1P09661 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SNRPA1P09661 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
SNRPA1P09661 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
SNRPA1P09661 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.46□□□□□ -2.02
SNRPA1P09661 Y_RNA.8-201ENST00000362353 102 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 Y_RNA.99-201ENST00000363138 105 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 RNU4-13P-201ENST00000364019 141 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 RNA5SP160-201ENST00000364866 120 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 RNU6-804P-201ENST00000384286 107 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 RPL23AP54-201ENST00000495129 419 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 SCARNA8-201ENST00000515924 131 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 RNU6-453P-201ENST00000516819 85 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 RNU6-1212P-201ENST00000517023 104 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 RNU7-172P-201ENST00000517125 64 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.46□□□□□ -2.02
SNRPA1P09661 AC127455.1-201ENST00000565496 145 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 AC005336.3-201ENST00000623833 2679 ntBASIC2.46□□□□□ -2.02
SNRPA1P09661 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNRPA1P09661 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNRPA1P09661 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNRPA1P09661 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SNRPA1P09661 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SNRPA1P09661 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SNRPA1P09661 MIR367-201ENST00000362299 68 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 RNU6-1323P-201ENST00000384025 107 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 AL162725.1-201ENST00000435405 301 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 AL021397.1-201ENST00000451806 248 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 AC245047.8-201ENST00000456455 284 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 AC025033.1-201ENST00000463883 194 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 AC091021.1-201ENST00000468051 388 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 RPL36AP21-201ENST00000490372 323 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 Y_RNA.797-201ENST00000515977 94 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 RN7SKP164-201ENST00000516138 266 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 RNU6-1007P-201ENST00000516586 107 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.45□□□□□ -2.02
SNRPA1P09661 MIR4724-201ENST00000579485 89 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 AC022202.1-201ENST00000613515 211 ntBASIC2.45□□□□□ -2.02
SNRPA1P09661 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
SNRPA1P09661 snoU2-30.2-201ENST00000362805 70 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 RNU1-17P-201ENST00000363022 152 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms