Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 POLR3GP1-201ENST00000594073 261 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.16□□□□□ -2.06
PDGFRBP09619 AL513423.1-201ENST00000621695 132 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PDGFRBP09619 ICE2P2-201ENST00000483823 2787 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
PDGFRBP09619 Y_RNA.149-201ENST00000363558 117 ntBASIC2.15□□□□□ -2.07
PDGFRBP09619 RNA5SP160-201ENST00000364866 120 ntBASIC2.15□□□□□ -2.07
PDGFRBP09619 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.15□□□□□ -2.07
PDGFRBP09619 Y_RNA.574-201ENST00000384766 95 ntBASIC2.15□□□□□ -2.07
PDGFRBP09619 MTCO1P5-201ENST00000433573 344 ntBASIC2.15□□□□□ -2.07
PDGFRBP09619 HSPE1P24-201ENST00000450782 238 ntBASIC2.15□□□□□ -2.07
PDGFRBP09619 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
PDGFRBP09619 TRBVB-201ENST00000477100 408 ntBASIC2.15□□□□□ -2.07
PDGFRBP09619 SNORA77B-201ENST00000578179 125 ntBASIC2.15□□□□□ -2.07
PDGFRBP09619 AL353621.2-201ENST00000605340 133 ntBASIC2.15□□□□□ -2.07
PDGFRBP09619 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.15□□□□□ -2.07
PDGFRBP09619 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PDGFRBP09619 SNORD33-201ENST00000362761 85 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 RNU6-203P-201ENST00000384038 104 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 MIR504-201ENST00000385065 83 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 MIR1302-6-201ENST00000408466 90 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.14□□□□□ -2.07
PDGFRBP09619 RNU6-570P-201ENST00000517051 105 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.14□□□□□ -2.07
PDGFRBP09619 AP003357.1-201ENST00000604497 148 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.14□□□□□ -2.07
PDGFRBP09619 MIR548AY-201ENST00000617669 107 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 MIR8063-201ENST00000621930 81 ntBASIC2.14□□□□□ -2.07
PDGFRBP09619 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PDGFRBP09619 RNU6-1080P-201ENST00000383982 107 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 MIR194-1-201ENST00000384892 85 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 MIR1289-2-201ENST00000408360 111 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 MIR548F4-201ENST00000408515 105 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 RNU6-1203P-201ENST00000410703 110 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 AL161935.2-201ENST00000414627 60 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 MTND2P23-201ENST00000422990 651 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 AC099513.1-201ENST00000490423 301 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 Y_RNA.714-201ENST00000517065 90 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 MIR7843-201ENST00000622274 79 ntBASIC2.13□□□□□ -2.07
PDGFRBP09619 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PDGFRBP09619 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PDGFRBP09619 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.12□□□□□ -2.07
PDGFRBP09619 AC104332.1-201ENST00000440471 797 ntBASIC2.12□□□□□ -2.07
PDGFRBP09619 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
PDGFRBP09619 RPL23AP54-201ENST00000495129 419 ntBASIC2.12□□□□□ -2.07
PDGFRBP09619 SERF1AP1-201ENST00000514575 187 ntBASIC2.12□□□□□ -2.07
PDGFRBP09619 RNU6-1338P-201ENST00000516328 91 ntBASIC2.12□□□□□ -2.07
PDGFRBP09619 RNU7-115P-201ENST00000516433 55 ntBASIC2.12□□□□□ -2.07
PDGFRBP09619 MIR8062-201ENST00000621515 85 ntBASIC2.12□□□□□ -2.07
PDGFRBP09619 AC095038.3-201ENST00000634439 195 ntBASIC2.12□□□□□ -2.07
PDGFRBP09619 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PDGFRBP09619 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PDGFRBP09619 SNORA72.4-201ENST00000384174 132 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 MIR513A1-201ENST00000385138 129 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 AC005908.1-201ENST00000468701 347 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 AC117454.1-201ENST00000491120 168 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 OR9P1P-201ENST00000496431 281 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 AC024405.2-202ENST00000532731 184 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PDGFRBP09619 MIR4422-201ENST00000581938 83 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 AL078604.3-201ENST00000615580 211 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 SNORD3E-202ENST00000627253 216 ntBASIC2.11□□□□□ -2.07
PDGFRBP09619 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
PDGFRBP09619 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PDGFRBP09619 RNU6-899P-201ENST00000363947 107 ntBASIC2.1□□□□□ -2.07
PDGFRBP09619 RNU4-41P-201ENST00000364426 143 ntBASIC2.1□□□□□ -2.07
PDGFRBP09619 MIR660-201ENST00000385235 97 ntBASIC2.1□□□□□ -2.07
PDGFRBP09619 MIR1302-3-201ENST00000408128 138 ntBASIC2.1□□□□□ -2.07
PDGFRBP09619 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.1□□□□□ -2.07
PDGFRBP09619 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
PDGFRBP09619 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
PDGFRBP09619 AC127455.1-201ENST00000565496 145 ntBASIC2.1□□□□□ -2.07
PDGFRBP09619 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
PDGFRBP09619 WWP1P1-201ENST00000466609 2769 ntBASIC2.1□□□□□ -2.07
PDGFRBP09619 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PDGFRBP09619 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
PDGFRBP09619 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDGFRBP09619 SNORD68-201ENST00000363214 84 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 RNU6-801P-201ENST00000364087 105 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 U8.7-201ENST00000364940 136 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 Y_RNA.376-201ENST00000365638 108 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 Y_RNA.461-201ENST00000384263 103 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 AL358176.2-201ENST00000425769 204 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 AC025033.1-201ENST00000463883 194 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 AC091959.1-201ENST00000495857 238 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 RNA5SP168-201ENST00000516642 112 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 SNORA27.4-201ENST00000516650 95 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.09□□□□□ -2.07
PDGFRBP09619 DEFB108E-201ENST00000524692 240 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 DEFB122-202ENST00000569013 197 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 MIR2681-201ENST00000581814 105 ntBASIC2.09□□□□□ -2.07
PDGFRBP09619 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDGFRBP09619 AL391987.6-201ENST00000305671 199 ntBASIC2.08□□□□□ -2.08
PDGFRBP09619 Y_RNA.16-201ENST00000362421 102 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms