Protein–RNA interactions for Protein: P08575

PTPRC, Receptor-type tyrosine-protein phosphatase C, humanhuman

Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRCP08575 RNU6-63P-201ENST00000516690 95 ntBASIC1.78□□□□□ -2.12
PTPRCP08575 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.78□□□□□ -2.12
PTPRCP08575 SUB1P4-201ENST00000566062 339 ntBASIC1.78□□□□□ -2.12
PTPRCP08575 AP001282.2-201ENST00000616149 309 ntBASIC1.78□□□□□ -2.12
PTPRCP08575 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
PTPRCP08575 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.78□□□□□ -2.12
PTPRCP08575 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.78□□□□□ -2.12
PTPRCP08575 ZNF209P-201ENST00000593450 2304 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 Y_RNA.136-201ENST00000363444 102 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 Y_RNA.172-201ENST00000363765 102 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 RNU6-117P-201ENST00000365415 107 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 MIR1302-3-201ENST00000408128 138 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 HSPE1P13-201ENST00000451143 297 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 RNU7-95P-201ENST00000459222 64 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 AL163195.1-201ENST00000496941 348 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 RNU7-99P-201ENST00000516271 62 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 RNU2-31P-201ENST00000516954 155 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 AC024995.1-201ENST00000523014 93 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 DEFB108E-201ENST00000524692 240 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 AC084364.2-201ENST00000546924 395 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 DNAJC19P9-201ENST00000555084 351 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.77□□□□□ -2.13
PTPRCP08575 AC073413.2-201ENST00000604332 360 ntBASIC1.77□□□□□ -2.13
PTPRCP08575 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
PTPRCP08575 RNU6-1019P-201ENST00000364424 107 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 RNU6-326P-201ENST00000365480 107 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.76□□□□□ -2.13
PTPRCP08575 RNU6-574P-201ENST00000384265 107 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 RNU6-196P-201ENST00000384315 107 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 SNORD116-13-201ENST00000384408 92 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PTPRCP08575 SNORA53-201ENST00000391141 249 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 RNU6-710P-201ENST00000410424 105 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 MTCO1P5-201ENST00000433573 344 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 SNRPGP13-201ENST00000442212 177 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.76□□□□□ -2.13
PTPRCP08575 SCARNA24.2-201ENST00000516968 130 ntBASIC1.76□□□□□ -2.13
PTPRCP08575 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.76□□□□□ -2.13
PTPRCP08575 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.76□□□□□ -2.13
PTPRCP08575 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PTPRCP08575 Y_RNA.144-201ENST00000363521 113 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 Y_RNA.237-201ENST00000364439 102 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 RNU6-855P-201ENST00000410395 104 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 RNA5SP100-201ENST00000410903 110 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 RNA5SP59-201ENST00000410922 110 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 AP1B1P2-201ENST00000416196 106 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.75□□□□□ -2.13
PTPRCP08575 AC010154.1-201ENST00000425857 269 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 AC024067.1-201ENST00000426199 223 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 AL135790.2-201ENST00000437701 267 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 RPS26P45-201ENST00000471748 340 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 RNU6-1278P-201ENST00000516130 107 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 RNA5SP61-201ENST00000516453 100 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 MIR4503-201ENST00000582187 83 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.75□□□□□ -2.13
PTPRCP08575 AC037487.3-201ENST00000606668 112 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 U6.104-201ENST00000637979 90 ntBASIC1.75□□□□□ -2.13
PTPRCP08575 AL391987.6-201ENST00000305671 199 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 RNU6-112P-201ENST00000363599 104 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 Y_RNA.164-201ENST00000363709 102 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 Y_RNA.238-201ENST00000364441 102 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 RNU6-136P-201ENST00000384663 107 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 RNU6-376P-201ENST00000384731 106 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 AL158823.1-201ENST00000418441 478 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 BTF3P4-201ENST00000418852 495 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.74□□□□□ -2.13
PTPRCP08575 SERF1AP1-201ENST00000514575 187 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 RNU6-191P-201ENST00000516295 94 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.74□□□□□ -2.13
PTPRCP08575 RPL21P9-201ENST00000556149 474 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 MIR4421-201ENST00000578133 69 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 7SK.10-201ENST00000621414 298 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.74□□□□□ -2.13
PTPRCP08575 SNORA25.1-201ENST00000362326 128 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 Y_RNA.341-201ENST00000365341 102 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 RNU6-463P-201ENST00000384340 107 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 RNU6-296P-201ENST00000384608 107 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 RNA5SP511-201ENST00000410487 115 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 AL606517.2-201ENST00000442855 241 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 RPL23AP6-201ENST00000446637 472 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 RPS20P10-201ENST00000451209 253 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 AC108729.3-201ENST00000513484 108 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PTPRCP08575 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 AC004832.4-201ENST00000608952 331 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.73□□□□□ -2.13
PTPRCP08575 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.73□□□□□ -2.13
PTPRCP08575 AC008555.8-201ENST00000623602 2168 ntBASIC1.73□□□□□ -2.13
PTPRCP08575 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
PTPRCP08575 SNORA63D-201ENST00000364359 132 ntBASIC1.72□□□□□ -2.13
PTPRCP08575 Y_RNA.310-201ENST00000365063 113 ntBASIC1.72□□□□□ -2.13
PTPRCP08575 Y_RNA.368-201ENST00000365547 113 ntBASIC1.72□□□□□ -2.13
PTPRCP08575 RNU6-514P-201ENST00000384208 107 ntBASIC1.72□□□□□ -2.13
PTPRCP08575 Y_RNA.556-201ENST00000384677 113 ntBASIC1.72□□□□□ -2.13
PTPRCP08575 MIR520A-201ENST00000384862 85 ntBASIC1.72□□□□□ -2.13
PTPRCP08575 RNA5SP109-201ENST00000391010 116 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms