Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 MIR583-201ENST00000384846 75 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 AC009414.1-201ENST00000427200 443 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 RPS27P1-201ENST00000450552 247 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.44□□□□□ -2.02
COL3A1P02461 RNU2-58P-201ENST00000516403 183 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.44□□□□□ -2.02
COL3A1P02461 RPS15AP11-201ENST00000594193 385 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 U7.2-201ENST00000607576 63 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 AC084768.2-201ENST00000622736 221 ntBASIC2.44□□□□□ -2.02
COL3A1P02461 AC131280.1-202ENST00000624067 4211 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 AL391516.1-201ENST00000554380 2449 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL3A1P02461 Y_RNA.229-201ENST00000364347 113 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 RNU6-768P-201ENST00000384683 107 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 RNU6-460P-201ENST00000391158 108 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 AL445685.2-201ENST00000422551 342 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.43□□□□□ -2.02
COL3A1P02461 HSPE1P21-201ENST00000438283 308 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 snoU13.14-201ENST00000459372 104 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 AC090255.1-201ENST00000495779 349 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.43□□□□□ -2.02
COL3A1P02461 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.43□□□□□ -2.02
COL3A1P02461 HMGN2P15-201ENST00000585707 270 ntBASIC2.43□□□□□ -2.02
COL3A1P02461 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL3A1P02461 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.42□□□□□ -2.02
COL3A1P02461 ZNF702P-202ENST00000434269 1966 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 MIR367-201ENST00000362299 68 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 SNORD114-7-201ENST00000362520 77 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 RNU4-15P-201ENST00000362613 141 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 SNORA18.2-201ENST00000383865 132 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 Y_RNA.393-201ENST00000383936 102 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 MIR591-201ENST00000385290 95 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 AL133475.1-201ENST00000404414 305 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 SNORA79-201ENST00000408376 140 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 AC004866.1-201ENST00000411748 78 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 RNA5SP182-201ENST00000516064 82 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 RNU1-61P-201ENST00000516107 151 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 RNU6-561P-201ENST00000516222 102 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 CYCSP26-201ENST00000534107 320 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 AC127455.1-201ENST00000565496 145 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 MIR3609-201ENST00000582661 80 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 AC091152.3-201ENST00000604227 325 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 AL670379.2-201ENST00000604983 252 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 RPL17P51-201ENST00000605218 238 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 AL110115.1-201ENST00000614396 364 ntBASIC2.42□□□□□ -2.02
COL3A1P02461 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.42□□□□□ -2.02
COL3A1P02461 Y_RNA.43-201ENST00000362670 111 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 MIR499A-201ENST00000384903 122 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 RNY4P18-201ENST00000391107 89 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 SNORA75.5-201ENST00000391291 81 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 AL627390.1-201ENST00000396055 340 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 HSPE1P26-201ENST00000405341 275 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 HSPE1P13-201ENST00000451143 297 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 RNA5SP310-201ENST00000459084 116 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 snoU13.28-201ENST00000459235 104 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 MIR4679-2-201ENST00000578358 77 ntBASIC2.41□□□□□ -2.02
COL3A1P02461 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.41□□□□□ -2.02
COL3A1P02461 Y_RNA.361-201ENST00000365515 120 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 RNU6-1144P-201ENST00000384247 104 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 SNORA67.2-201ENST00000384300 149 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 RNU6-476P-201ENST00000384726 107 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 RNU4-43P-201ENST00000410628 137 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 AIMP1P2-201ENST00000425294 312 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.4□□□□□ -2.02
COL3A1P02461 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.4□□□□□ -2.02
COL3A1P02461 AC011753.1-201ENST00000451001 220 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 AC145146.1-201ENST00000496370 254 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 CYCTP-201ENST00000504253 315 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 RNU6-250P-201ENST00000516958 103 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.4□□□□□ -2.02
COL3A1P02461 Y_RNA.757-201ENST00000578934 114 ntBASIC2.4□□□□□ -2.02
COL3A1P02461 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.4□□□□□ -2.02
COL3A1P02461 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
COL3A1P02461 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
COL3A1P02461 Y_RNA.251-201ENST00000364551 99 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 U8.7-201ENST00000364940 136 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 RNU6-429P-201ENST00000384582 108 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 MIR548B-201ENST00000385247 97 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
COL3A1P02461 AL591034.1-201ENST00000407447 340 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 RNA5SP504-201ENST00000410676 117 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 AC023141.4-201ENST00000412031 328 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.39□□□□□ -2.03
COL3A1P02461 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.39□□□□□ -2.03
COL3A1P02461 RPL23AP63-201ENST00000498752 471 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 RNU7-115P-201ENST00000516433 55 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 Y_RNA.709-201ENST00000516952 92 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 AC090142.3-201ENST00000519012 385 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 AC012640.5-201ENST00000623897 319 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL3A1P02461 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.39□□□□□ -2.03
COL3A1P02461 AC026241.1-201ENST00000517873 2142 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
COL3A1P02461 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
COL3A1P02461 SNORA63.4-201ENST00000362763 126 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 Y_RNA.116-201ENST00000363292 103 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 RNU6-1210P-201ENST00000363775 107 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 RNU6-915P-201ENST00000364943 103 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 MIR147B-201ENST00000390185 80 ntBASIC2.39□□□□□ -2.03
COL3A1P02461 Y_RNA.584-201ENST00000391090 114 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms