Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 MIR1298-201ENST00000408783 112 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC093019.1-201ENST00000443135 252 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 FCF1P4-201ENST00000448326 183 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 CHEK2P4-201ENST00000450340 246 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.653-201ENST00000459091 95 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC005840.1-201ENST00000498412 377 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.67□□□□□ -2.3
HLA-DQA1P01909 CYCTP-201ENST00000504253 315 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.67□□□□□ -2.3
HLA-DQA1P01909 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 RNU7-4P-201ENST00000516961 62 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC011604.1-201ENST00000545978 196 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.67□□□□□ -2.3
HLA-DQA1P01909 MIR4659A-201ENST00000580269 81 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC005176.2-201ENST00000596933 147 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC113139.1-201ENST00000605049 239 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 AC027279.3-201ENST00000625055 122 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.67□□□□□ -2.3
HLA-DQA1P01909 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
HLA-DQA1P01909 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
HLA-DQA1P01909 MIR337-201ENST00000362281 93 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 RNA5SP432-201ENST00000362480 116 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 SNORD114-27-201ENST00000363766 70 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 RNU6-324P-201ENST00000363957 106 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.336-201ENST00000365307 109 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.390-201ENST00000383932 102 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 MIR559-201ENST00000385188 96 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 SNORD12-201ENST00000391002 90 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 SNORA75.2-201ENST00000391138 150 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 SNORA75.3-201ENST00000391231 150 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 RNU6-321P-201ENST00000410912 106 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 RNU2-61P-201ENST00000411069 191 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 AC138393.2-201ENST00000414742 246 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 MLLT10P1-201ENST00000418346 262 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.66□□□□□ -2.3
HLA-DQA1P01909 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.66□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.638-201ENST00000459374 113 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 PRDX4P1-201ENST00000507189 574 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 SNORA70.12-201ENST00000516084 153 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 RNU6-155P-201ENST00000516347 100 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 RNU6-699P-201ENST00000517081 110 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 AL355073.2-201ENST00000612106 557 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 U2.1-201ENST00000618978 145 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 AC012676.2-201ENST00000619258 186 ntBASIC0.66□□□□□ -2.3
HLA-DQA1P01909 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
HLA-DQA1P01909 RNY1P10-201ENST00000363268 113 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 RNU6-1105P-201ENST00000384774 107 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 MIR516B2-201ENST00000385190 85 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 SNORD78.2-201ENST00000391076 69 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.65□□□□□ -2.31
HLA-DQA1P01909 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.65□□□□□ -2.31
HLA-DQA1P01909 RPS20P10-201ENST00000451209 253 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 RNU7-21P-201ENST00000459430 62 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 SNORA20.3-201ENST00000516880 132 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 MIR4762-201ENST00000585261 75 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 AL391903.3-201ENST00000612158 163 ntBASIC0.65□□□□□ -2.31
HLA-DQA1P01909 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
HLA-DQA1P01909 U8.5-201ENST00000364528 136 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 Y_RNA.253-201ENST00000364562 112 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 RNU6-392P-201ENST00000364926 101 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 Y_RNA.329-201ENST00000365209 107 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 SNORD116-29-201ENST00000384516 83 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 MIR522-201ENST00000385071 87 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 AL390729.2-201ENST00000416137 156 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 AL603825.1-201ENST00000438481 80 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 AC098614.3-201ENST00000438957 440 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 AC245047.8-201ENST00000456455 284 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 HMGN1P7-201ENST00000491722 313 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 RNU6-277P-201ENST00000516272 106 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 SNORD111.1-201ENST00000516421 86 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.64□□□□□ -2.31
HLA-DQA1P01909 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.64□□□□□ -2.31
HLA-DQA1P01909 RNU6-490P-201ENST00000362985 107 ntBASIC0.63□□□□□ -2.31
HLA-DQA1P01909 Y_RNA.146-201ENST00000363549 102 ntBASIC0.63□□□□□ -2.31
HLA-DQA1P01909 MIR452-201ENST00000385020 85 ntBASIC0.63□□□□□ -2.31
HLA-DQA1P01909 RBMX2P4-201ENST00000441256 376 ntBASIC0.63□□□□□ -2.31
HLA-DQA1P01909 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DQA1P01909 RNU6-351P-201ENST00000516097 100 ntBASIC0.63□□□□□ -2.31
HLA-DQA1P01909 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DQA1P01909 MIR4661-201ENST00000582720 75 ntBASIC0.63□□□□□ -2.31
HLA-DQA1P01909 AC005972.2-201ENST00000604690 348 ntBASIC0.63□□□□□ -2.31
HLA-DQA1P01909 AC022441.3-201ENST00000605737 136 ntBASIC0.63□□□□□ -2.31
HLA-DQA1P01909 U6.92-201ENST00000636464 89 ntBASIC0.63□□□□□ -2.31
HLA-DQA1P01909 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.62□□□□□ -2.31
HLA-DQA1P01909 SNORA25.3-201ENST00000363205 127 ntBASIC0.62□□□□□ -2.31
HLA-DQA1P01909 Y_RNA.142-201ENST00000363491 102 ntBASIC0.62□□□□□ -2.31
HLA-DQA1P01909 SNORD50B-201ENST00000364995 70 ntBASIC0.62□□□□□ -2.31
HLA-DQA1P01909 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
HLA-DQA1P01909 RNU6-1297P-201ENST00000384415 104 ntBASIC0.62□□□□□ -2.31
HLA-DQA1P01909 RNU7-90P-201ENST00000459216 62 ntBASIC0.62□□□□□ -2.31
HLA-DQA1P01909 PDCD5P2-201ENST00000507570 312 ntBASIC0.62□□□□□ -2.31
HLA-DQA1P01909 RNU7-41P-201ENST00000515917 61 ntBASIC0.62□□□□□ -2.31
HLA-DQA1P01909 SNORD45.4-201ENST00000516629 73 ntBASIC0.62□□□□□ -2.31
HLA-DQA1P01909 Y_RNA.718-201ENST00000517110 102 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms