Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNU6-1337P-201ENST00000516525 95 ntBASIC1.25□□□□□ -2.21
CSDE1O75534 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.25□□□□□ -2.21
CSDE1O75534 MIR4778-201ENST00000577635 80 ntBASIC1.25□□□□□ -2.21
CSDE1O75534 AC091178.2-201ENST00000584401 117 ntBASIC1.25□□□□□ -2.21
CSDE1O75534 AC136443.5-201ENST00000603741 370 ntBASIC1.25□□□□□ -2.21
CSDE1O75534 Y_RNA.772-201ENST00000606692 102 ntBASIC1.25□□□□□ -2.21
CSDE1O75534 AC106754.2-201ENST00000623006 233 ntBASIC1.25□□□□□ -2.21
CSDE1O75534 AC091925.1-201ENST00000623204 462 ntBASIC1.25□□□□□ -2.21
CSDE1O75534 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CSDE1O75534 SNORD114-7-201ENST00000362520 77 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 Y_RNA.80-201ENST00000362996 102 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 SNORA25.8-201ENST00000364831 128 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 RNU5E-4P-201ENST00000364931 120 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 RNU6-1175P-201ENST00000365200 107 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 RNU6-117P-201ENST00000365415 107 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 Y_RNA.419-201ENST00000384041 102 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 Y_RNA.485-201ENST00000384395 102 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 Y_RNA.526-201ENST00000384572 110 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 RPEP5-201ENST00000441137 268 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 SNORA40.14-201ENST00000516543 86 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 RN7SKP295-201ENST00000517264 153 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.24□□□□□ -2.21
CSDE1O75534 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 MIR4452-201ENST00000583004 71 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 AL117336.2-201ENST00000602435 335 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 AL080274.1-201ENST00000605565 220 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 AL050343.2-201ENST00000607338 280 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 MIR8065-201ENST00000620577 100 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 MIR6767-201ENST00000637302 66 ntBASIC1.24□□□□□ -2.21
CSDE1O75534 MIR369-201ENST00000362155 70 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 Y_RNA.191-201ENST00000363972 113 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 RNU6-867P-201ENST00000364956 107 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 RNY1P14-201ENST00000384426 108 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 MIR660-201ENST00000385235 97 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 RNA5SP511-201ENST00000410487 115 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 AL354751.2-201ENST00000415471 210 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 AL049830.1-201ENST00000468034 425 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 RNU7-28P-201ENST00000516759 62 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.23□□□□□ -2.21
CSDE1O75534 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 SNORD58B-201ENST00000607313 66 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 AC007485.1-201ENST00000616755 206 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 AC090971.5-201ENST00000621102 293 ntBASIC1.23□□□□□ -2.21
CSDE1O75534 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CSDE1O75534 AC005592.1-201ENST00000566527 1640 ntBASIC1.22□□□□□ -2.21
CSDE1O75534 RNU4-76P-201ENST00000364509 141 ntBASIC1.22□□□□□ -2.21
CSDE1O75534 RNA5SP482-201ENST00000391269 118 ntBASIC1.22□□□□□ -2.21
CSDE1O75534 CALM2P4-201ENST00000430810 426 ntBASIC1.22□□□□□ -2.21
CSDE1O75534 HSPE1P13-201ENST00000451143 297 ntBASIC1.22□□□□□ -2.21
CSDE1O75534 AC005042.3-201ENST00000453230 174 ntBASIC1.22□□□□□ -2.21
CSDE1O75534 RNA5SP168-201ENST00000516642 112 ntBASIC1.22□□□□□ -2.21
CSDE1O75534 CYP3A52P-201ENST00000563326 91 ntBASIC1.22□□□□□ -2.21
CSDE1O75534 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.22□□□□□ -2.21
CSDE1O75534 AL121655.1-201ENST00000605811 308 ntBASIC1.22□□□□□ -2.21
CSDE1O75534 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CSDE1O75534 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CSDE1O75534 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CSDE1O75534 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.21□□□□□ -2.22
CSDE1O75534 Y_RNA.813-201ENST00000364639 102 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 RNU1-93P-201ENST00000364704 169 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 Y_RNA.331-201ENST00000365267 102 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 Y_RNA.355-201ENST00000365462 98 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 Y_RNA.361-201ENST00000365515 120 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 Y_RNA.439-201ENST00000384119 94 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 Y_RNA.445-201ENST00000384168 102 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 RNU6-424P-201ENST00000384367 105 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 SNORD116-13-201ENST00000384408 92 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 Y_RNA.570-201ENST00000384750 101 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 U8.16-201ENST00000391279 133 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 RNU5A-5P-201ENST00000411054 116 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 AL162725.1-201ENST00000435405 301 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 AC092991.1-201ENST00000477176 376 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 RNU7-110P-201ENST00000516891 62 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 AC022441.3-201ENST00000605737 136 ntBASIC1.21□□□□□ -2.22
CSDE1O75534 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
CSDE1O75534 RNU4-50P-201ENST00000364361 141 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 Y_RNA.329-201ENST00000365209 107 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 SNORD14.1-201ENST00000365609 90 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 Y_RNA.424-201ENST00000384063 103 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 Y_RNA.458-201ENST00000384240 102 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 Y_RNA.471-201ENST00000384312 102 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 RNU6-308P-201ENST00000390957 107 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 RNU2-61P-201ENST00000411069 191 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 RNU6-1199P-201ENST00000411249 104 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 AL390729.2-201ENST00000416137 156 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 U8.20-201ENST00000459445 131 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 OR9P1P-201ENST00000496431 281 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.2□□□□□ -2.22
CSDE1O75534 RNU7-12P-201ENST00000516030 62 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 RNU6-436P-201ENST00000516171 114 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 AC040926.1-201ENST00000530195 238 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 AC011373.1-201ENST00000607270 237 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms