Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MIR4282-201ENST00000583613 67 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.771-201ENST00000598668 102 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 AL162424.1-201ENST00000602325 221 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.78□□□□□ -2.12
ZIC3O60481 BX284668.6-201ENST00000606899 438 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 AL008718.3-201ENST00000610217 321 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.789-201ENST00000622480 102 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
ZIC3O60481 AC068700.1-201ENST00000565862 3754 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
ZIC3O60481 Y_RNA.54-201ENST00000362766 105 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 Y_RNA.122-201ENST00000363331 96 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 SNORD27-201ENST00000363981 72 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 RNA5SP109-201ENST00000391010 116 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 RNU11-5P-201ENST00000391216 129 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 AL158823.1-201ENST00000418441 478 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 HSPE1P21-201ENST00000438283 308 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 AC069257.2-201ENST00000441819 155 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 RNU7-94P-201ENST00000459576 63 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 AC079804.2-201ENST00000490376 200 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 RNU7-115P-201ENST00000516433 55 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 RNU6-341P-201ENST00000516973 96 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 RNU6-1271P-201ENST00000517049 105 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 RNU6-1096P-201ENST00000517089 102 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ZIC3O60481 AC110588.1-201ENST00000559699 137 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 AP003357.1-201ENST00000604497 148 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 MIR7843-201ENST00000622274 79 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.77□□□□□ -2.13
ZIC3O60481 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ZIC3O60481 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ZIC3O60481 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
ZIC3O60481 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ZIC3O60481 AC134026.1-201ENST00000623249 2239 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
ZIC3O60481 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.76□□□□□ -2.13
ZIC3O60481 Y_RNA.76-201ENST00000362931 109 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 RNU4-13P-201ENST00000364019 141 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 MIR520A-201ENST00000384862 85 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 MIR520G-201ENST00000385064 90 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 AL512604.1-201ENST00000404812 257 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 MIR1289-2-201ENST00000408360 111 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 BTF3P11-201ENST00000426582 477 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 AC117454.1-201ENST00000491120 168 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 RNA5SP437-201ENST00000517249 129 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 AC024405.2-202ENST00000532731 184 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 AC002984.1-201ENST00000591692 448 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 POLR3GP1-201ENST00000594073 261 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 AC013791.1-201ENST00000616619 62 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 MIR548AY-201ENST00000617669 107 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.76□□□□□ -2.13
ZIC3O60481 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.76□□□□□ -2.13
ZIC3O60481 AP000553.5-201ENST00000641933 54 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 AC008555.8-201ENST00000623602 2168 ntBASIC1.76□□□□□ -2.13
ZIC3O60481 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
ZIC3O60481 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ZIC3O60481 AC100821.1-201ENST00000523153 2479 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
ZIC3O60481 RNU6-899P-201ENST00000363947 107 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 SNORA20.1-201ENST00000364790 130 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 RNU6-211P-201ENST00000384047 107 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 SNORA72-201ENST00000384339 132 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 Y_RNA.489-201ENST00000384410 101 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 MIR504-201ENST00000385065 83 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 MTCO2P33-201ENST00000402100 465 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 AC009310.1-201ENST00000414414 451 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 RNA5SP233-201ENST00000459153 113 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 RPL23AP63-201ENST00000498752 471 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 RNU7-116P-201ENST00000516940 62 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 AC127455.1-201ENST00000565496 145 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 AL773524.1-201ENST00000614065 229 ntBASIC1.75□□□□□ -2.13
ZIC3O60481 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ZIC3O60481 RNA5SP432-201ENST00000362480 116 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 RNU6-379P-201ENST00000363813 104 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 MIR562-201ENST00000384894 95 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
ZIC3O60481 U8.13-201ENST00000390842 128 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 RNA5SP212-201ENST00000391223 107 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 Y_RNA.590-201ENST00000410140 107 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 RNU6-717P-201ENST00000459076 104 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 RNU6-1291P-201ENST00000516591 104 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 RNU6-111P-201ENST00000517179 105 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 AL358944.1-201ENST00000528537 144 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.74□□□□□ -2.13
ZIC3O60481 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.74□□□□□ -2.13
ZIC3O60481 AC011604.1-201ENST00000545978 196 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 MIR5692C2-201ENST00000577959 77 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 MIR4287-201ENST00000579398 78 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.74□□□□□ -2.13
ZIC3O60481 AC011921.3-201ENST00000605540 361 ntBASIC1.74□□□□□ -2.13
ZIC3O60481 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.74□□□□□ -2.13
ZIC3O60481 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ZIC3O60481 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
ZIC3O60481 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
ZIC3O60481 RNU6-338P-201ENST00000383888 105 ntBASIC1.73□□□□□ -2.13
ZIC3O60481 AL356379.1-201ENST00000414105 126 ntBASIC1.73□□□□□ -2.13
ZIC3O60481 AC245047.3-201ENST00000429428 127 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms