Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 RNY3P4-201ENST00000384428 101 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 SNORD78.2-201ENST00000391076 69 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 Y_RNA.605-201ENST00000410577 105 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 Y_RNA.619-201ENST00000410951 90 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.81□□□□□ -2.28
CXCL13O43927 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.81□□□□□ -2.28
CXCL13O43927 PRDX4P1-201ENST00000507189 574 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 RNU6-470P-201ENST00000515954 104 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 AC011604.1-201ENST00000545978 196 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 AC136932.1-201ENST00000574771 208 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 MIR4661-201ENST00000582720 75 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 AC005176.2-201ENST00000596933 147 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 AC103810.9-201ENST00000606688 112 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 AL096861.1-201ENST00000610899 123 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 AL008636.1-201ENST00000625038 1018 ntBASIC0.81□□□□□ -2.28
CXCL13O43927 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 Y_RNA.226-201ENST00000364337 114 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 SNORD114-24-201ENST00000365029 72 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 MIR452-201ENST00000385020 85 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 AC093019.1-201ENST00000443135 252 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 RPL30P15-201ENST00000457129 321 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 RPS26P48-201ENST00000491713 339 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 RNU6-559P-201ENST00000516151 98 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.8□□□□□ -2.28
CXCL13O43927 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 MIR4452-201ENST00000583004 71 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 AL020996.3-201ENST00000606617 222 ntBASIC0.8□□□□□ -2.28
CXCL13O43927 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CXCL13O43927 U8.5-201ENST00000364528 136 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 Y_RNA.314-201ENST00000365114 102 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 RNU6-969P-201ENST00000383900 105 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 RNU6-20P-201ENST00000384106 107 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 MIR520E-201ENST00000384867 87 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 MIR628-201ENST00000385229 95 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 MIR1287-201ENST00000408492 90 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 RNU2-61P-201ENST00000411069 191 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 RNA5SP247-201ENST00000411181 105 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 MRPS18CP6-201ENST00000423587 223 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.79□□□□□ -2.28
CXCL13O43927 MTCO3P10-201ENST00000455912 772 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 AC245047.8-201ENST00000456455 284 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 Y_RNA.653-201ENST00000459091 95 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 RNU6-155P-201ENST00000516347 100 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.79□□□□□ -2.28
CXCL13O43927 AC113139.1-201ENST00000605049 239 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 AL391903.3-201ENST00000612158 163 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 AC133104.2-201ENST00000615272 193 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 AC011476.5-201ENST00000615594 130 ntBASIC0.79□□□□□ -2.28
CXCL13O43927 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CXCL13O43927 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.78□□□□□ -2.28
CXCL13O43927 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
CXCL13O43927 RNU6-626P-201ENST00000363354 107 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 Y_RNA.224-201ENST00000364308 111 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 RNU6-1187P-201ENST00000364771 110 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 SNORA75.2-201ENST00000391138 150 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 SNORA75.3-201ENST00000391231 150 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 MIR1298-201ENST00000408783 112 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.78□□□□□ -2.28
CXCL13O43927 CHEK2P4-201ENST00000450340 246 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 RPS20P10-201ENST00000451209 253 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 RNU7-90P-201ENST00000459216 62 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 RNU7-21P-201ENST00000459430 62 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 RNU6-1012P-201ENST00000516606 109 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 MIR4659A-201ENST00000580269 81 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 MIR3192-201ENST00000584920 77 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 MIR4762-201ENST00000585261 75 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 PRELID3BP2-201ENST00000605362 201 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 U2.1-201ENST00000618978 145 ntBASIC0.78□□□□□ -2.28
CXCL13O43927 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CXCL13O43927 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 Y_RNA.172-201ENST00000363765 102 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 Y_RNA.446-201ENST00000384178 104 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 Y_RNA.474-201ENST00000384341 102 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 MIR516B2-201ENST00000385190 85 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 Y_RNA.599-201ENST00000410489 109 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 RNU6-1199P-201ENST00000411249 104 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.77□□□□□ -2.29
CXCL13O43927 snoU13.25-201ENST00000458945 104 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 RPL39P28-201ENST00000465655 155 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 AC022616.4-201ENST00000522985 181 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 AC211469.2-201ENST00000605461 205 ntBASIC0.77□□□□□ -2.29
CXCL13O43927 Y_RNA.253-201ENST00000364562 112 ntBASIC0.76□□□□□ -2.29
CXCL13O43927 RNU1-36P-201ENST00000365130 165 ntBASIC0.76□□□□□ -2.29
CXCL13O43927 Y_RNA.505-201ENST00000384489 102 ntBASIC0.76□□□□□ -2.29
CXCL13O43927 MLLT10P1-201ENST00000418346 262 ntBASIC0.76□□□□□ -2.29
CXCL13O43927 RPS29P1-201ENST00000465274 159 ntBASIC0.76□□□□□ -2.29
CXCL13O43927 SNORA25.10-201ENST00000515926 124 ntBASIC0.76□□□□□ -2.29
CXCL13O43927 RNU6-436P-201ENST00000516171 114 ntBASIC0.76□□□□□ -2.29
CXCL13O43927 RNU6-911P-201ENST00000516523 104 ntBASIC0.76□□□□□ -2.29
CXCL13O43927 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
CXCL13O43927 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
CXCL13O43927 RNU6-1084P-201ENST00000362498 107 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms