Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 EBAG9P1-201ENST00000418955 543 ntBASIC1.93□□□□□ -2.1
LDB2O43679 AC104332.1-201ENST00000440471 797 ntBASIC1.93□□□□□ -2.1
LDB2O43679 RPS27P21-201ENST00000486977 252 ntBASIC1.93□□□□□ -2.1
LDB2O43679 RNU7-99P-201ENST00000516271 62 ntBASIC1.93□□□□□ -2.1
LDB2O43679 RNU6-63P-201ENST00000516690 95 ntBASIC1.93□□□□□ -2.1
LDB2O43679 SNORA31.25-201ENST00000517242 134 ntBASIC1.93□□□□□ -2.1
LDB2O43679 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.93□□□□□ -2.1
LDB2O43679 AC011921.3-201ENST00000605540 361 ntBASIC1.93□□□□□ -2.1
LDB2O43679 AC022513.1-201ENST00000624512 117 ntBASIC1.93□□□□□ -2.1
LDB2O43679 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
LDB2O43679 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
LDB2O43679 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LDB2O43679 RNU6-862P-201ENST00000362804 105 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNU6-899P-201ENST00000363947 107 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNU6-1048P-201ENST00000364054 107 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNU6-200P-201ENST00000364743 107 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNY4P28-201ENST00000365281 93 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNU6-376P-201ENST00000384731 106 ntBASIC1.92□□□□□ -2.1
LDB2O43679 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNA5SP467-201ENST00000391274 118 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNU6-1186P-201ENST00000410429 97 ntBASIC1.92□□□□□ -2.1
LDB2O43679 HMGN2P38-201ENST00000423806 265 ntBASIC1.92□□□□□ -2.1
LDB2O43679 AL162725.1-201ENST00000435405 301 ntBASIC1.92□□□□□ -2.1
LDB2O43679 HSPE1P21-201ENST00000438283 308 ntBASIC1.92□□□□□ -2.1
LDB2O43679 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.92□□□□□ -2.1
LDB2O43679 U8.19-201ENST00000459095 133 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNU7-141P-201ENST00000459304 62 ntBASIC1.92□□□□□ -2.1
LDB2O43679 AC055731.1-201ENST00000474387 401 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNU1-142P-201ENST00000516682 145 ntBASIC1.92□□□□□ -2.1
LDB2O43679 RNU7-128P-201ENST00000517247 62 ntBASIC1.92□□□□□ -2.1
LDB2O43679 AC024995.1-201ENST00000523014 93 ntBASIC1.92□□□□□ -2.1
LDB2O43679 AC130289.1-201ENST00000577321 73 ntBASIC1.92□□□□□ -2.1
LDB2O43679 AC005972.2-201ENST00000604690 348 ntBASIC1.92□□□□□ -2.1
LDB2O43679 AC013791.1-201ENST00000616619 62 ntBASIC1.92□□□□□ -2.1
LDB2O43679 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
LDB2O43679 AC068647.2-201ENST00000637380 353 ntBASIC1.92□□□□□ -2.1
LDB2O43679 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
LDB2O43679 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
LDB2O43679 Y_RNA.199-201ENST00000364014 102 ntBASIC1.91□□□□□ -2.1
LDB2O43679 Y_RNA.304-201ENST00000365011 112 ntBASIC1.91□□□□□ -2.1
LDB2O43679 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.91□□□□□ -2.1
LDB2O43679 RNU6-1323P-201ENST00000384025 107 ntBASIC1.91□□□□□ -2.1
LDB2O43679 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
LDB2O43679 MIR597-201ENST00000384968 97 ntBASIC1.91□□□□□ -2.1
LDB2O43679 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
LDB2O43679 MTCO2P33-201ENST00000402100 465 ntBASIC1.91□□□□□ -2.1
LDB2O43679 AC019129.1-201ENST00000403786 261 ntBASIC1.91□□□□□ -2.1
LDB2O43679 RNA5SP511-201ENST00000410487 115 ntBASIC1.91□□□□□ -2.1
LDB2O43679 AC099677.2-201ENST00000436385 175 ntBASIC1.91□□□□□ -2.1
LDB2O43679 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.91□□□□□ -2.1
LDB2O43679 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.91□□□□□ -2.1
LDB2O43679 RNU7-116P-201ENST00000516940 62 ntBASIC1.91□□□□□ -2.1
LDB2O43679 RNU6-548P-201ENST00000517083 115 ntBASIC1.91□□□□□ -2.1
LDB2O43679 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
LDB2O43679 AP005660.1-201ENST00000522972 293 ntBASIC1.91□□□□□ -2.1
LDB2O43679 AC015720.1-201ENST00000565251 277 ntBASIC1.91□□□□□ -2.1
LDB2O43679 MIR5692C2-201ENST00000577959 77 ntBASIC1.91□□□□□ -2.1
LDB2O43679 MIR4529-201ENST00000578110 78 ntBASIC1.91□□□□□ -2.1
LDB2O43679 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
LDB2O43679 AC073413.2-201ENST00000604332 360 ntBASIC1.91□□□□□ -2.1
LDB2O43679 MIR548AY-201ENST00000617669 107 ntBASIC1.91□□□□□ -2.1
LDB2O43679 U6.108-201ENST00000637764 58 ntBASIC1.91□□□□□ -2.1
LDB2O43679 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LDB2O43679 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LDB2O43679 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
LDB2O43679 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
LDB2O43679 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
LDB2O43679 Y_RNA.83-201ENST00000363005 113 ntBASIC1.9□□□□□ -2.11
LDB2O43679 SNORA33-201ENST00000363664 130 ntBASIC1.9□□□□□ -2.11
LDB2O43679 RNU4-13P-201ENST00000364019 141 ntBASIC1.9□□□□□ -2.11
LDB2O43679 RNA5SP99-201ENST00000364020 114 ntBASIC1.9□□□□□ -2.11
LDB2O43679 RNU6-907P-201ENST00000390924 102 ntBASIC1.9□□□□□ -2.11
LDB2O43679 RNA5SP323-201ENST00000391094 133 ntBASIC1.9□□□□□ -2.11
LDB2O43679 Y_RNA.626-201ENST00000411288 95 ntBASIC1.9□□□□□ -2.11
LDB2O43679 RPS26P45-201ENST00000471748 340 ntBASIC1.9□□□□□ -2.11
LDB2O43679 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.9□□□□□ -2.11
LDB2O43679 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.9□□□□□ -2.11
LDB2O43679 RNU6-138P-201ENST00000515952 107 ntBASIC1.9□□□□□ -2.11
LDB2O43679 RNU7-115P-201ENST00000516433 55 ntBASIC1.9□□□□□ -2.11
LDB2O43679 Y_RNA.700-201ENST00000516806 100 ntBASIC1.9□□□□□ -2.11
LDB2O43679 RNU6-295P-201ENST00000516901 104 ntBASIC1.9□□□□□ -2.11
LDB2O43679 AP003357.1-201ENST00000604497 148 ntBASIC1.9□□□□□ -2.11
LDB2O43679 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.9□□□□□ -2.11
LDB2O43679 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
LDB2O43679 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
LDB2O43679 AC134026.1-201ENST00000623249 2239 ntBASIC1.89□□□□□ -2.11
LDB2O43679 MIR411-201ENST00000362239 96 ntBASIC1.89□□□□□ -2.11
LDB2O43679 Y_RNA.274-201ENST00000364714 101 ntBASIC1.89□□□□□ -2.11
LDB2O43679 U8.7-201ENST00000364940 136 ntBASIC1.89□□□□□ -2.11
LDB2O43679 SNORA8-201ENST00000384574 139 ntBASIC1.89□□□□□ -2.11
LDB2O43679 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
LDB2O43679 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
LDB2O43679 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
LDB2O43679 AL445685.2-201ENST00000422551 342 ntBASIC1.89□□□□□ -2.11
LDB2O43679 AC117454.1-201ENST00000491120 168 ntBASIC1.89□□□□□ -2.11
LDB2O43679 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.89□□□□□ -2.11
LDB2O43679 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.89□□□□□ -2.11
LDB2O43679 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.89□□□□□ -2.11
LDB2O43679 POLR3GP1-201ENST00000594073 261 ntBASIC1.89□□□□□ -2.11
LDB2O43679 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms